Transcript Information: S_Transcript_110736.p1


Annotated TAIR IDAT1G16830.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:5760793-5762619 | Forward length=608
E-Value1.2E-143
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.2867467728007
Replicate 22.1245649203533
Replicate 32.4590314778134
Condition 2: 8 Hour
Replicate 13.5700283049423
Replicate 24.4743697279453
Replicate 33.5368517507525
Condition 3: 24 Hour
Replicate 11.9741302117426
Replicate 21.2758886517055
Replicate 31.9430315689867


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_110736.p1 GENE.S_Transcript_110736~~S_Transcript_110736.p1 ORF type:complete len:675 (+),score=103.47,PPR_2|PF13041.2|0.0091,PPR_2|PF13041.2|0.72,PPR_2|PF13041.2|0.0008,PPR_2|PF13041.2|5.2e-14,PPR_2|PF13041.2|1.9e-10,PPR_2|PF13041.2|1.4e-06,PPR_2|PF13041.2|5.3e-14,PPR_2|PF13041.2|1.5e-06,PPR_2|PF13041.2|0.61,PPR_2|PF13041.2|5.4e-11,PPR_2|PF13041.2|1.6e-06,PPR|PF01535.16|16,PPR|PF01535.16|5.8,PPR|PF01535.16|1.1e+02,PPR|PF01535.16|23,PPR|PF01535.16|6.5e-07,PPR|PF01535.16|3.7e-05,PPR|PF01535.16|0.073,PPR|PF01535.16|1.8e-06,PPR|PF01535.16|0.0014,PPR|PF01535.16|0.83,PPR|PF01535.16|0.078,PPR|PF01535.16|3.5e-05,PPR_1|PF12854.3|0.21,PPR_1|PF12854.3|1.5e+02,PPR_1|PF12854.3|25,PPR_1|PF12854.3|6.3e-07,PPR_1|PF12854.3|7.3e-09,PPR_1|PF12854.3|12,PPR_1|PF12854.3|2.4e+02,PPR_1|PF12854.3|1.2e-05,PPR_1|PF12854.3|1.6e-05,PPR_1|PF12854.3|10,PPR_1|PF12854.3|30,PPR_1|PF12854.3|0.0092,PPR_3|PF13812.2|3.4e+03,PPR_3|PF13812.2|0.25,PPR_3|PF13812.2|5.6e+02,PPR_3|PF13812.2|85,PPR_3|PF13812.2|0.00049,PPR_3|PF13812.2|5.6e-06,PPR_3|PF13812.2|3.6e+02,PPR_3|PF13812.2|2.5e+03,PPR_3|PF13812.2|7.2,PPR_3|PF13812.2|79,PPR_3|PF13812.2|2.1e+03,PPR_3|PF13812.2|4.1e+02,PPR_3|PF13812.2|0.13 S_Transcript_110736:371-2395(+)
ATGTTATGGAAACATGTATTGTTTCCAAAGCTATCAACTAACCCACTTAAATTTGAAGCTTTAAAAGCTCTTGGGACCTTCTCACCATGTTTGAATGGAAATACCCACAAGTTATATAGCAGTAAAACCCCAAGTTCTGAACTGGGTCGATGCTCAAAAAAAGTGGGTTTTAATCTAACCCCAACTTTTGTGCACTCTACAATGGCTAATTGTTCATCTGATTTAGTTGCTTCGAGCTTCTTTATGTGGTTTGCAAGGCAAAATAATTATTTTCATGATCGCCTCGCGTTTACCCATATGGTTCCTGTTGTTGGTAGACTTGTCTTGAAGTTTGATTCAGTTGATGAGATTGTTAGACGGTTAAAGGATGTTGGTTGTGTTATTAAGGCACAAACCTTTTTGCTTTTGCTTAGGATTTTTTGGCTGGGAGGAATGTATAGTTTGGTGTTTGATGTATTTGAGGATATGAATAAGTTTGGGTATACCGTGAATACATTTGTGTATAATGTAATTATTGATGTTTCATTTAAGATTGGCCGTAAGGATGTGGCGTTAAGAATACTAAGGGAGATTGAGGTCCCTAATTTTTTGAGCTTCAATATTGCTGTATGTAATCTTTGCAAGTTGAATGATTTGGAGAATTTGCAGGGTGTTATAAGGATCATGTTGAGGTCTGGGTATTATCCTGATCCAAAGACATTTGTTAAGGTTCTAAATTGTTTCTGTAAAAAGGGTACCCTAATACAGACCTTTCAAGTTTTAGGGCTCATGATTGGTTTAGGAATTCAAGTCTCTGTAGCTGTTTGGAATATTTTGATTGATGGATTGTGCAAAACAGGAAGGCCTGTTGCTGCTTCTAAGATACTGGATAAGATGATTGTTAGTGGTTGCTCTCCAAATGTTGTGACTTACACTTCTTTACTGAAGGCATTTATGGAGTTTGAAATGGTTGATGATGCTTTTAAGATACTTTCAATGATGGAAGAAAATGGATGCGAACCAGACTTGTTTTTTTCAAATATTTTGATGCATCGGCTCTCGAAAATGGGGATGTATAATAAAGCTGTGGGCATTTTCTTTGACTTGAGAAAGCGTAATATGAAGCCTGATTTATATACTTTTGCTTCTCTCTTTTCTGCCATTCGATTGTCAGGAAAATTTCATCTCCTTCCTCAGCTGGTTAAAGGAGTTCCCCTTCCAGCTGATGTTGTAATTTGTAACTCCCTTCTTAGTTGTTTATGTAAGGCTGGGCTTTCGCGTCATGCTGTAGAATTTTACCATGAAATGGAGGATAGTGGCTACACACCAGACAAGTATAGTTATACTGAATTACTTGTTGGACTCTGCAGAGATAGAAAAATTGACGAAGCAGTGAATTTGTACCGGCGAATGGTTATGAGCCACTTCAATCTTGATGCTTATGTCCATACTGTTGTAATCGATGGGCTCATTAAAGTTGGGAAGTATCACCAAGCTATTTACTTCTTCAAGCAGGTTTTGGCCAAGAATTACTCTTTGGATGTTGTATTATGCACAGTTGGCATTGAGGGACTTGTTAGAGGAAACATGGTAGGCGAAGCATTGACTTTGTATAATAAGATGAAGGAACTTGGGGCTAGTCCTAATGCACATTTATACAATCTTATGCTTTCTGGTCTTTGCAAGGAAAGAGATGTCAATATGGTTAAAATGATTCTACAGGAAATGCATGATAAAGGAGTTAAACTAGAGTATAGAACTTTTATCAGGATGTCAAATGTTGTGTTTGAATCAAGATATTACTTTCCAGTCTTTAATCTATTGGTTAAGATGTGGAATTCAGGATTGGTGGCGGATAATCTCATGCGTATACTTTTGCTTGAAGGGCATTCCCGTGGCATCATAGTAGGTGATATGTTTGTGTTACTCAAAAGGTTTGTGGGAGATAACTCATTCATAGACACATCCAGGTCAAAAAGGTATTTAGTTGAAGAGACATCCAGTTTGGATGACCTTTCAGTTGCTGTTGCATCAGTTGGTTGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_110736.p1 GENE.S_Transcript_110736~~S_Transcript_110736.p1 ORF type:complete len:675 (+),score=103.47,PPR_2|PF13041.2|0.0091,PPR_2|PF13041.2|0.72,PPR_2|PF13041.2|0.0008,PPR_2|PF13041.2|5.2e-14,PPR_2|PF13041.2|1.9e-10,PPR_2|PF13041.2|1.4e-06,PPR_2|PF13041.2|5.3e-14,PPR_2|PF13041.2|1.5e-06,PPR_2|PF13041.2|0.61,PPR_2|PF13041.2|5.4e-11,PPR_2|PF13041.2|1.6e-06,PPR|PF01535.16|16,PPR|PF01535.16|5.8,PPR|PF01535.16|1.1e+02,PPR|PF01535.16|23,PPR|PF01535.16|6.5e-07,PPR|PF01535.16|3.7e-05,PPR|PF01535.16|0.073,PPR|PF01535.16|1.8e-06,PPR|PF01535.16|0.0014,PPR|PF01535.16|0.83,PPR|PF01535.16|0.078,PPR|PF01535.16|3.5e-05,PPR_1|PF12854.3|0.21,PPR_1|PF12854.3|1.5e+02,PPR_1|PF12854.3|25,PPR_1|PF12854.3|6.3e-07,PPR_1|PF12854.3|7.3e-09,PPR_1|PF12854.3|12,PPR_1|PF12854.3|2.4e+02,PPR_1|PF12854.3|1.2e-05,PPR_1|PF12854.3|1.6e-05,PPR_1|PF12854.3|10,PPR_1|PF12854.3|30,PPR_1|PF12854.3|0.0092,PPR_3|PF13812.2|3.4e+03,PPR_3|PF13812.2|0.25,PPR_3|PF13812.2|5.6e+02,PPR_3|PF13812.2|85,PPR_3|PF13812.2|0.00049,PPR_3|PF13812.2|5.6e-06,PPR_3|PF13812.2|3.6e+02,PPR_3|PF13812.2|2.5e+03,PPR_3|PF13812.2|7.2,PPR_3|PF13812.2|79,PPR_3|PF13812.2|2.1e+03,PPR_3|PF13812.2|4.1e+02,PPR_3|PF13812.2|0.13 S_Transcript_110736:371-2395(+)
MLWKHVLFPKLSTNPLKFEALKALGTFSPCLNGNTHKLYSSKTPSSELGRCSKKVGFNLTPTFVHSTMANCSSDLVASSFFMWFARQNNYFHDRLAFTHMVPVVGRLVLKFDSVDEIVRRLKDVGCVIKAQTFLLLLRIFWLGGMYSLVFDVFEDMNKFGYTVNTFVYNVIIDVSFKIGRKDVALRILREIEVPNFLSFNIAVCNLCKLNDLENLQGVIRIMLRSGYYPDPKTFVKVLNCFCKKGTLIQTFQVLGLMIGLGIQVSVAVWNILIDGLCKTGRPVAASKILDKMIVSGCSPNVVTYTSLLKAFMEFEMVDDAFKILSMMEENGCEPDLFFSNILMHRLSKMGMYNKAVGIFFDLRKRNMKPDLYTFASLFSAIRLSGKFHLLPQLVKGVPLPADVVICNSLLSCLCKAGLSRHAVEFYHEMEDSGYTPDKYSYTELLVGLCRDRKIDEAVNLYRRMVMSHFNLDAYVHTVVIDGLIKVGKYHQAIYFFKQVLAKNYSLDVVLCTVGIEGLVRGNMVGEALTLYNKMKELGASPNAHLYNLMLSGLCKERDVNMVKMILQEMHDKGVKLEYRTFIRMSNVVFESRYYFPVFNLLVKMWNSGLVADNLMRILLLEGHSRGIIVGDMFVLLKRFVGDNSFIDTSRSKRYLVEETSSLDDLSVAVASVGC*

Click here to download the sequence:
Link to NCBI Protein BLAST