Transcript Information: S_Transcript_110789.p1


Annotated TAIR IDAT1G10600.1
Annotated Gene Nameassociated molecule with the SH3 domain of STAM 2
Annotated Gene Symbol(s)AMSH2
Annotation TypeOrtholog
Chromosome Positionchr1:3503765-3505190 | Forward length=223
E-Value1.2E-97
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.584592649758
Replicate 23.8934334513261
Replicate 34.4169578015346
Condition 2: 8 Hour
Replicate 15.107341378473
Replicate 23.9479732893635
Replicate 33.6720577806901
Condition 3: 24 Hour
Replicate 12.3864158435103
Replicate 23.6185917642908
Replicate 33.0732743182705


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_110789.p1 GENE.S_Transcript_110789~~S_Transcript_110789.p1 ORF type:complete len:238 (+),score=33.24,JAB|PF01398.17|2.5e-15 S_Transcript_110789:38-751(+)
ATGGAGGAAATTATCCAACTGACCAAATCCACTCAAGTCCAAGGGTTTAAGAATATGGTCACACATTTTCCTTCTACTGCAATCTCTTGCACAGAGGTTGCACCTAATGCCACACCAATTTCCCATATATCAGCATGTGATTCACGATATGGACATTCAGATTCCTCATCTCATGAGCTTAAAAGTGTGCATATTTCAGCTCAATTAATGGAGGATTTTCTTCAACTTGCTAGGAAGAACACCGACAAGGATCTTGAGACATGTGGGGTTCTTGGTGCTTTTCTTAAAGAGGAGACATTCTATGCTACCACGTTGATTATACCAAAACAGGAGGCAACTTCTAGTTCATGTCAGGCACTAAAGGAAGAGGAGATTTTTAACATACAGAATGACAGATCCCTTGTCCCTGTAGGATGGATTCATACTCATCCCTCCCAAAGTTGTTTTATGTCTTCGATAGATCTGCACACGCAGTATCCATATCAGGTCATGGTACCAGAGGCCATAGCCATTGTCATGGCACCGACTGATAAGACAAGGAATTTCGGAATATTCCGATTGACTGATCCTAGTGGCATGACTGTTCTTAGAGACTGCCAAGAGGAGGGGTTCCACCCTCACCGGGATTCTAGTGATGGGAGGCCCTTATACGAGCAGTGTTCACATGTTTATATCAACCCAAATCTGAGATTTGAAATCTTCGATTTACGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_110789.p1 GENE.S_Transcript_110789~~S_Transcript_110789.p1 ORF type:complete len:238 (+),score=33.24,JAB|PF01398.17|2.5e-15 S_Transcript_110789:38-751(+)
MEEIIQLTKSTQVQGFKNMVTHFPSTAISCTEVAPNATPISHISACDSRYGHSDSSSHELKSVHISAQLMEDFLQLARKNTDKDLETCGVLGAFLKEETFYATTLIIPKQEATSSSCQALKEEEIFNIQNDRSLVPVGWIHTHPSQSCFMSSIDLHTQYPYQVMVPEAIAIVMAPTDKTRNFGIFRLTDPSGMTVLRDCQEEGFHPHRDSSDGRPLYEQCSHVYINPNLRFEIFDLR*

Click here to download the sequence:
Link to NCBI Protein BLAST