Transcript Information: S_Transcript_110793.p1


Annotated TAIR IDAT1G10600.1
Annotated Gene Nameassociated molecule with the SH3 domain of STAM 2
Annotated Gene Symbol(s)AMSH2
Annotation TypeOrtholog
Chromosome Positionchr1:3503765-3505190 | Forward length=223
E-Value3.9E-77
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9959750926385
Replicate 21.9304940862825
Replicate 30.92213680418003
Condition 2: 8 Hour
Replicate 11.9992553422312
Replicate 21.1185924319863
Replicate 33.4638252358095
Condition 3: 24 Hour
Replicate 11.5018357399783
Replicate 20.84989293411303
Replicate 33.4680311057035


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_110793.p1 GENE.S_Transcript_110793~~S_Transcript_110793.p1 ORF type:complete len:160 (+),score=12.20,JAB|PF01398.17|2.8e-10 S_Transcript_110793:788-1267(+)
ATGTGGGGTTCTTGGTGCTTTTCTTTCAGGTTTTTGAATCGATACACTCAGAAAGAGGAGACATTCTATGCTACCACGTTGATTATACCAAAACAGGAGGCAACTTCTAGTTCATGTCAGGCACTAAAGGAAGAGGAGATTTTTAACATACAGAATGACAGATCCCTTGTCCCTGTAGGATGGATTCATACTCATCCCTCCCAAAGTTGTTTTATGTCTTCGATAGATCTGCACACGCAGTATCCATATCAGGTCATGGTACCAGAGGCCATAGCCATTGTCATGGCACCGACTGATAAGACAAGGAATTTCGGAATATTCCGATTGACTGATCCTAGTGGCATGACTGTTCTTAGAGACTGCCAAGAGGAGGGGTTCCACCCTCACCGGGATTCTAGTGATGGGAGGCCCTTATACGAGCAGTGTTCACATGTTTATATCAACCCAAATCTGAGATTTGAAATCTTCGATTTACGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_110793.p1 GENE.S_Transcript_110793~~S_Transcript_110793.p1 ORF type:complete len:160 (+),score=12.20,JAB|PF01398.17|2.8e-10 S_Transcript_110793:788-1267(+)
MWGSWCFSFRFLNRYTQKEETFYATTLIIPKQEATSSSCQALKEEEIFNIQNDRSLVPVGWIHTHPSQSCFMSSIDLHTQYPYQVMVPEAIAIVMAPTDKTRNFGIFRLTDPSGMTVLRDCQEEGFHPHRDSSDGRPLYEQCSHVYINPNLRFEIFDLR*

Click here to download the sequence:
Link to NCBI Protein BLAST