Transcript Information: S_Transcript_110796.p1


Annotated TAIR IDAT1G10600.1
Annotated Gene Nameassociated molecule with the SH3 domain of STAM 2
Annotated Gene Symbol(s)AMSH2
Annotation TypeHomolog
Chromosome Positionchr1:3503765-3505190 | Forward length=223
E-Value3E-27
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.17394118454366
Replicate 20.43260371681402
Replicate 30.60270379358172
Condition 2: 8 Hour
Replicate 10.41814490817908
Replicate 20.87732739763634
Replicate 30.69659632696018
Condition 3: 24 Hour
Replicate 11.5705471790623
Replicate 21.4812948742711
Replicate 30.49454989029639


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_110796.p1 GENE.S_Transcript_110796~~S_Transcript_110796.p1 ORF type:3prime_partial len:153 (-),score=27.75 S_Transcript_110796:1-456(-)
ATGGAGGAAATTATCCAACTGACCAAATCCACTCAAGTCCAAGGGTTTAAGAATATGGTCACACATTTTCCTTCTACTGCAATCTCTTGCACAGAGGTTGCACCTAATGCCACACCAATTTCCCATATATCAGCATGTGATTCACGATATGGACATTCAGATTCCTCATCTCATGAACTTAAAAGTGTGCATATTTCAGCTCAATTAATGGAGGATTTTCTTCAACTTGCTAGGAAGAACACCGACAAGGATCTTGAGACATGTGGGGTTCTTGGTGCTTTTCTTAAAGAGGAGACATTCTATGCTACCACGTTGATTATACCAAAACAGGAGGCAACTTCTAGTTCATGTCAGGCACTAAAGGTACAGAATGACCGATCCCTTGTCCCTGTAGGATGGATTCATGTATGTCTCTTATCTGAGCTAGTCTTGCTTCTAGACGCATCCCTCCCAAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_110796.p1 GENE.S_Transcript_110796~~S_Transcript_110796.p1 ORF type:3prime_partial len:153 (-),score=27.75 S_Transcript_110796:1-456(-)
MEEIIQLTKSTQVQGFKNMVTHFPSTAISCTEVAPNATPISHISACDSRYGHSDSSSHELKSVHISAQLMEDFLQLARKNTDKDLETCGVLGAFLKEETFYATTLIIPKQEATSSSCQALKVQNDRSLVPVGWIHVCLLSELVLLLDASLPK

Click here to download the sequence:
Link to NCBI Protein BLAST