Transcript Information: S_Transcript_110813.p1


Annotated TAIR IDAT3G04950.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: SEC-C motif (InterPro:IPR004027); Has 583 Blast hits to 583 proteins in 248 species: Archae - 0; Bacteria - 488; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:1371786-1373300 | Forward length=231
E-Value9.4E-96
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.136389889205
Replicate 214.475585908777
Replicate 313.185304530357
Condition 2: 8 Hour
Replicate 119.298995762111
Replicate 222.473078724069
Replicate 323.534238984685
Condition 3: 24 Hour
Replicate 19.2914889055016
Replicate 210.050015993131
Replicate 311.070309082788


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_110813.p1 GENE.S_Transcript_110813~~S_Transcript_110813.p1 ORF type:complete len:221 (+),score=41.91 S_Transcript_110813:200-862(+)
ATGGCCAACACAATCTGGGGTCACATTCGCAAGAGCAATTCCATCTTCAACTATTACTATCATCACCCTCAAACTCCCCTAATCCTATCCCAGACCCGTTCAATCCATGCCACGTCACAGCTTGATTTCTCATGGATGGACACAATTAAAGGGGTTTTCACTGGCAAGAAATCCCCTTCTGGGTCTGAATCTTCTGAAGATTTCACCCTCTTGCGTTTTGCTGATGAGTTGGGTAAGGCAAGGAAGTTGGGATCTTTAAAGCAATTCGTAGTCGGTCGAAGTAGTGAAGCCACATTTGCTGATGCCTTTGGAAAGCAGGAACAGATTCTTCGGTTTCTTGGTGCTTTTGATCCTACAGGACAGAATCTCCGAAACAGTCAAAAACAAGAAGCTGCAACGCACTGCAAATGCACGATAGCTGATGTTGAGAATACTTTGGCGAAGTTTGCATGGGCCAAAGATGCACAAAAGAAACTACAGAAGTTAAAGGAAGAGGGAAAACCAATGCCTAAGACCATGGCTGAGGTACAAAAGTTGATGGGATCTACGCCTTTGGATCTTGCAAGATCCAACATGGCTAAGAGTGGTCAGATTAGTAGGAATGCGTTTTGTCCCTGTGGTTCAAAAAAGAGATACAAAAGGTGCTGTGGAAAAGATCAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_110813.p1 GENE.S_Transcript_110813~~S_Transcript_110813.p1 ORF type:complete len:221 (+),score=41.91 S_Transcript_110813:200-862(+)
MANTIWGHIRKSNSIFNYYYHHPQTPLILSQTRSIHATSQLDFSWMDTIKGVFTGKKSPSGSESSEDFTLLRFADELGKARKLGSLKQFVVGRSSEATFADAFGKQEQILRFLGAFDPTGQNLRNSQKQEAATHCKCTIADVENTLAKFAWAKDAQKKLQKLKEEGKPMPKTMAEVQKLMGSTPLDLARSNMAKSGQISRNAFCPCGSKKRYKRCCGKDQ*

Click here to download the sequence:
Link to NCBI Protein BLAST