Transcript Information: S_Transcript_11088.p2


Annotated TAIR IDAT5G07810.1
Annotated Gene NameSNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:2491412-2498484 | Reverse length=1190
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.5088237463755
Replicate 26.8966172857065
Replicate 36.9660696350503
Condition 2: 8 Hour
Replicate 14.7218302728239
Replicate 26.5075854943344
Replicate 36.0770216760945
Condition 3: 24 Hour
Replicate 16.9233422350798
Replicate 25.6085553973305
Replicate 36.1321323589863


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_11088.p2 GENE.S_Transcript_11088~~S_Transcript_11088.p2 ORF type:complete len:691 (+),score=137.32,Helicase_C|PF00271.27|9e-14,Helicase_C|PF00271.27|3.2e+03 S_Transcript_11088:5490-7562(+)
ATGAGATTAGAGCTGTGCTTGATGTGGCATCCAAGACTGAACGGAGAATTCTATTATCAGGGACACCTTCTTTATCAAGGTGATCATAGGCCATTTGACATTTATCACCAGATAAATATGTTATGGCCTGGCCTGCTGGGTAAGAGCAAGTTTGAGTTTGCAAAAACATATTGTTCTATGAAGCTTCTCAAGGATTCTCATGGCAATATATTCCAGGACTTCTCAAAGGGTACTCGTTTGGAGGAGCTGAATGTTTTACTCAAACAAACTGTTATGATACGACGCTTGAAGGAACATTTGCTAGTACAATTGCCACCTAAACGTAGGCAAATTATAAGGTTGTCATTGAAAAAATCGGACATTGTTTTTGCTAAGAGTGCAGAGATCCAAGGAGATAATTCTACAACCCGTTGTGCTGATGAAGATGAGGAGGAATATGAAAACAGAGGCAGAAAATCTCTTGATGAGCTCTCTTATCAAGTGCTTGGTATTGCCAAGGTCTTTGGGTTTCTTGAGTGGCTTTCCCTTCATCCAATTGTTGCTGAAGCAGATGACTCAATAGATGCTAATATGAATAGCAGTGCTCAGAAAATGATAATATTTGCTCACCATCACAAGGTTCTTGACAAAGTACAGGAGTTCATTTGTGACAAAGGCATTGGGTTTATACGCATTGATGGTAATACTCTTGATGGTGACAGGCAGATTGCTGTGAAGTCATTCCAGTCGCAGAAAGAGGTCAAGATTGCTATGATTGGAATTCAAGTTGGATATGCAGGGCTTGATCTTTCAGTTGCTCAAAATGTTGTCTTCTTAGAGCTTCCTAAGGACCCAAATTCCTTGCTCCAGGCTGAAGACAGAGCTCATAGAAGAGGACAAACCAATGCCGTCAATATTTATATATTCTGTGCAAAGGATACATCTGATGAATCACGCTGGGTGAGATTGAACAAGAGTGCACAGCGTGTTTCTACAACAATAAATGGCAAGTATGATGCTGTCCAAGAGATTAAGGTTGACAGCATTGCAGATCTAGGCAACATGACTGAATGTCAATGTGTTGAGTCAGCCAGTGCTGCCACACTGTATGGGGAGCATATTGCAGATGAGGATATGCAGCATAGGGAAGCAGATAAAGGAAACGTTAAGGGAGATGACAAGTTTGGTGTAACACCAGGGCAAATTGAGGATAGGCTTGATGAATTTACCCAAAGCCAGATCACCATCGATGTAGATTCACTTCGCTTTGCGGTGAGTCAATATACTGGAAGAGTCCACTTATGCACTTGCGACCCTGAAGAAGATTCAACAGTGAGATCGCTATATGAAAATTTCAGGCTTGAGGAAATCACTGCTGATTCCAACGAAAGAGCTGCCGTGCTCATTAAAATGAATCCTGCTTGCCAGCTTGCTATTCTGAGCTTCATAAATGAGTGGACAAACCTGAAGCGAATTGAGAAGAAAAAATTGTTTCGGAAGCCCTTGCAACTGCCTTTAGCTGTTGAACTGCGGCAAATTAGTGAATGCACCAACCATGATAGTCAGGGACTTCTCAAGGGAGGCAGCACGAGAAGACATACACCTTTATGCGAGATAAGCTACCCTCTAAGATCGGATGCTTTGGTGAGGGAGGTTAATATTTATGATGCTAAGAGGGTGAAGGAGAAAACCCATATACAGTTCTGGACACTGATGGATGAACCCTTATGCAAGCTTTGCCAAAATCCTTGCCAGGGTAATAATGCCAAGAAGCCCAGGGGTCTTCTAGATCTGTTTTGCTCAGTTGCATGTTATGAAGAATATCGTTCAAGAACTAGTGGCAGATTCCTTCGCGAGGAACTTTTTGAAATCGAACGTGGTGTTTGTTCAAATTGTCAACTAGACTGCCACAAGCTCGTACAGCACCTGAAACCATTAACAATAGAGAAGCGTAAAAAGTACATTGAAAGAGAGGCACCACAATTGTTGAAGCTCAAGAAATTGCTTGAGAAGCTGGTTCGTGAACCAACCGAAGGCAACGCCTGGCATGCAGACCACAAAGTTGCTGTTTACAAAGGAGGAGGTGAATGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_11088.p2 GENE.S_Transcript_11088~~S_Transcript_11088.p2 ORF type:complete len:691 (+),score=137.32,Helicase_C|PF00271.27|9e-14,Helicase_C|PF00271.27|3.2e+03 S_Transcript_11088:5490-7562(+)
MRLELCLMWHPRLNGEFYYQGHLLYQGDHRPFDIYHQINMLWPGLLGKSKFEFAKTYCSMKLLKDSHGNIFQDFSKGTRLEELNVLLKQTVMIRRLKEHLLVQLPPKRRQIIRLSLKKSDIVFAKSAEIQGDNSTTRCADEDEEEYENRGRKSLDELSYQVLGIAKVFGFLEWLSLHPIVAEADDSIDANMNSSAQKMIIFAHHHKVLDKVQEFICDKGIGFIRIDGNTLDGDRQIAVKSFQSQKEVKIAMIGIQVGYAGLDLSVAQNVVFLELPKDPNSLLQAEDRAHRRGQTNAVNIYIFCAKDTSDESRWVRLNKSAQRVSTTINGKYDAVQEIKVDSIADLGNMTECQCVESASAATLYGEHIADEDMQHREADKGNVKGDDKFGVTPGQIEDRLDEFTQSQITIDVDSLRFAVSQYTGRVHLCTCDPEEDSTVRSLYENFRLEEITADSNERAAVLIKMNPACQLAILSFINEWTNLKRIEKKKLFRKPLQLPLAVELRQISECTNHDSQGLLKGGSTRRHTPLCEISYPLRSDALVREVNIYDAKRVKEKTHIQFWTLMDEPLCKLCQNPCQGNNAKKPRGLLDLFCSVACYEEYRSRTSGRFLREELFEIERGVCSNCQLDCHKLVQHLKPLTIEKRKKYIEREAPQLLKLKKLLEKLVREPTEGNAWHADHKVAVYKGGGEC*

Click here to download the sequence:
Link to NCBI Protein BLAST