Transcript Information: S_Transcript_110967.p1


Annotated TAIR IDAT4G36810.1
Annotated Gene Namegeranylgeranyl pyrophosphate synthase 1
Annotated Gene Symbol(s)GGPS1
Annotation TypeOrtholog
Chromosome Positionchr4:17343513-17344628 | Forward length=371
E-Value7.4E-166
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.659031113518
Replicate 216.516618701896
Replicate 316.252024338863
Condition 2: 8 Hour
Replicate 19.6612265525133
Replicate 210.567917451363
Replicate 312.365546953166
Condition 3: 24 Hour
Replicate 113.155206079971
Replicate 215.589196360526
Replicate 313.16841544908


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_110967.p1 GENE.S_Transcript_110967~~S_Transcript_110967.p1 ORF type:5prime_partial len:362 (+),score=67.02,polyprenyl_synt|PF00348.13|2.3e-55 S_Transcript_110967:1-1086(+)
AATAATTATGGCCTCCACAACACCACCACCACCAACAGCAACAACCCTTTATTCTCTTCTATTTCCTCACTTTCTCTCTCCTCTTCCTCCAGAAGAAAACACACCACGTCCCCAATCTCAGCCATCCTCACCAAAAAAGAAACAACAATTGACCCACCAGAAAATAAGAAACCCCAACAACAACAAAAACCCTCATTTGATTTCAAAAGCTATATGGTGGAGAAAGCCAATTCTGTGAACCAAGCCCTAGATTTGGCGGTCCCTTTACGCCATCCTGAGAAAATCCATGAGGCTATGAGGTACTCGCTCTTAGCCGGTGGCAAGAGAGTCCGGCCTGTCTTATGCATTGCCGCTTGCGAGCTCGTTGGCGGCGATGCATCGGTGGCTATGCCCTCTGCTTGTGCTGTTGAGATGATACACACAATGTCTTTAATCCATGATGATCTCCCCTGCATGGACAACGACGACCTCCGGAGGGGAAAGCCTACCAATCACAAGGTCTTCGGTGAGGATGTCGCTGTCCTTGCAGGGGATTCCCTCCTAGCCCTGGCCTTCGAGCACCTCGCCATTGCTACCCCTCTGGGCCAGACCCCCCCGAAAAGAATCGTTCGGGCTACTGGGGAACTGGCCCTCGCTATCGGTGGCGAGGGGCTCGTGGCAGGACAGGTGGTAGATATCGACTTTGAAGGGGCCGAAAATGTTGGGATTGAGCAGCTCGAGTTTATTCATATCCATAAGACGGCTAAGCTCCTTGAGGCCGCGGTTGTTCTGGGCGTGATTGTAGGTGGTGGGAGCAACGAGGAGGTGGAGAAATTGAGGATGTTTGCTAGAAGGATAGGGTTGCTGTTCCAGGTTGTGGATGATATTCTAGATGTGACTAAATCTTCAGAGGAATTGGGTAAGACTGCAGGCAAGGACTTGGTTGCTGATAAGGTTACATATCCAAAATTAATGGGTATTGAAAAGTCAAAAGAGTATGCTCAAAGGTTGAACAATGAAGCCAAAGAAATGCTTGCTGGGTTTGATCTAGAGAAGGCTAAGCCCTTGATTGCTCTTGCAGATTATATAGCTTATAGGCAGAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_110967.p1 GENE.S_Transcript_110967~~S_Transcript_110967.p1 ORF type:5prime_partial len:362 (+),score=67.02,polyprenyl_synt|PF00348.13|2.3e-55 S_Transcript_110967:1-1086(+)
NNYGLHNTTTTNSNNPLFSSISSLSLSSSSRRKHTTSPISAILTKKETTIDPPENKKPQQQQKPSFDFKSYMVEKANSVNQALDLAVPLRHPEKIHEAMRYSLLAGGKRVRPVLCIAACELVGGDASVAMPSACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDSLLALAFEHLAIATPLGQTPPKRIVRATGELALAIGGEGLVAGQVVDIDFEGAENVGIEQLEFIHIHKTAKLLEAAVVLGVIVGGGSNEEVEKLRMFARRIGLLFQVVDDILDVTKSSEELGKTAGKDLVADKVTYPKLMGIEKSKEYAQRLNNEAKEMLAGFDLEKAKPLIALADYIAYRQN*

Click here to download the sequence:
Link to NCBI Protein BLAST