Transcript Information: S_Transcript_110973.p1


Annotated TAIR IDAT4G36810.1
Annotated Gene Namegeranylgeranyl pyrophosphate synthase 1
Annotated Gene Symbol(s)GGPS1
Annotation TypeOrtholog
Chromosome Positionchr4:17343513-17344628 | Forward length=371
E-Value9.8E-166
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 119.79088670535
Replicate 216.743081415474
Replicate 319.70657840405
Condition 2: 8 Hour
Replicate 112.557082623286
Replicate 213.513959330596
Replicate 312.335059020142
Condition 3: 24 Hour
Replicate 115.413394950216
Replicate 216.681485678022
Replicate 317.09209608164


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_110973.p1 GENE.S_Transcript_110973~~S_Transcript_110973.p1 ORF type:complete len:394 (-),score=83.65,polyprenyl_synt|PF00348.13|4.8e+03,polyprenyl_synt|PF00348.13|3.7e-56 S_Transcript_110973:247-1428(-)
ATGAGCAGTAGCAGTAGTGTGAATGCTGTGGGTGCTTTGCTTCAGACATGTTCACTCATTAGCACCAATTCCAGATCTAGATCTTCAATATCTTCTTTGAAGAATAATTGTGGCCTCCACAACACCACCAACAGCAACAACCCTTTATTCTCTTCTGTTTACTCACTTTCTCTCTCCTCTTCCTCCAGAAGAAAACCCACCATGTCCCCAATCTCAGCCATCCTCACCAAACAAGAAACAGCAATTGACCCACCAGAAAACAAGAAACCCCAACAACAACAACAACCCCCATTTGATTTCAAAAGCTATATGGTGGAGAAAGCCAATTCTGTGAACCAAGCCCTAGATTTGGCAGTTCCTTTACGCCATCCTGAGAAAATCCATGAGGCTATGAGGTACTCCCTCTTAGCCGGTGGCAAGAGGGTCCGGCCTGTCTTATGCATCGCCGCTTGCGAGCTCGTTGGTGGCGATGCATCGGTGGCTATGCCCTCTGCTTGTGCTGTTGAGATGATACACACAATGTCTCTAATCCATGATGATCTCCCTTGCATGGACAACGACGACCTCCGGAGGGGGAAACCTACCAATCACAAGGTCTTCGGTGAGGACGTCGCTGTCCTTGCAGGGGATTCTCTCCTAGCCTTGGCCTTTGAGCACCTCGCCACTGCTACCCCTCCGGGACAGGTCCCCCCGGAAAGAATCATTCGGGCTACCGGGGAATTGGCACTCGCTATCGGTGGTGAGGGGCTCGTGGCAGGACAGGTGGTAGATATTGACTCTGAAGGGGCCGAGAATGTTGGGATTGAGCAGCTCGAGTTTATTCATATCCATAAGACGGCTAAGCTCCTTGAGGCCGCGGTTGTTCTGGGTGCGATTGTAGGTAGTGGGAGCGATGAGGAGGTGGAGAAATTGAGGATGTTTGCTAGAAGGATAGGGTTGCTGTTCCAGGTTGTGGATGATATTCTAGATGTGACTAAATCTTCAGAGGAATTGGGTAAGACTGCAGGCAAGGACTTGGTTGCTGATAAGGTTACATATCCAAAATTAATGGGTATTGAAAAGTCAAAAGATTATGCTCAAAGGTTGAATAAGGAAGCCAAAGAAATGCTTGCTGGGTTTGATCTGGAGAAGGCTAAGCCCTTGATTGCTCTTGCAGATTATATAGCTTATAGGCAGAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_110973.p1 GENE.S_Transcript_110973~~S_Transcript_110973.p1 ORF type:complete len:394 (-),score=83.65,polyprenyl_synt|PF00348.13|4.8e+03,polyprenyl_synt|PF00348.13|3.7e-56 S_Transcript_110973:247-1428(-)
MSSSSSVNAVGALLQTCSLISTNSRSRSSISSLKNNCGLHNTTNSNNPLFSSVYSLSLSSSSRRKPTMSPISAILTKQETAIDPPENKKPQQQQQPPFDFKSYMVEKANSVNQALDLAVPLRHPEKIHEAMRYSLLAGGKRVRPVLCIAACELVGGDASVAMPSACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDSLLALAFEHLATATPPGQVPPERIIRATGELALAIGGEGLVAGQVVDIDSEGAENVGIEQLEFIHIHKTAKLLEAAVVLGAIVGSGSDEEVEKLRMFARRIGLLFQVVDDILDVTKSSEELGKTAGKDLVADKVTYPKLMGIEKSKDYAQRLNKEAKEMLAGFDLEKAKPLIALADYIAYRQN*

Click here to download the sequence:
Link to NCBI Protein BLAST