Transcript Information: S_Transcript_11102.p1


Annotated TAIR IDAT4G32060.1
Annotated Gene Namecalcium-binding EF hand family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:15501134-15503321 | Forward length=498
E-Value2.8E-194
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 135.378034065197
Replicate 233.545982074651
Replicate 330.24482828727
Condition 2: 8 Hour
Replicate 135.627230581012
Replicate 237.83362116377
Replicate 335.574912897051
Condition 3: 24 Hour
Replicate 133.922941939319
Replicate 241.846832978853
Replicate 338.607805173019


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_11102.p1 GENE.S_Transcript_11102~~S_Transcript_11102.p1 ORF type:5prime_partial len:586 (+),score=113.96,EF-hand_8|PF13833.2|2e+03,EF-hand_8|PF13833.2|0.0042,EF-hand_8|PF13833.2|0.0067,EF-hand_8|PF13833.2|1.2e+03,EF-hand_8|PF13833.2|1.7e-12,EF-hand_1|PF00036.28|9e-05,EF-hand_1|PF00036.28|4.4e-07,EF-hand_1|PF00036.28|40,EF-hand_1|PF00036.28|5.2e+02,EF-hand_1|PF00036.28|6.3e+03,EF-hand_1|PF00036.28|0.0012,EF-hand_6|PF13405.2|0.0055,EF-hand_6|PF13405.2|5.4e-06,EF-hand_6|PF13405.2|23,EF-hand_6|PF13405.2|3.1e+03,EF-hand_6|PF13405.2|4.2e+02,EF-hand_6|PF13405.2|0.0019,EF-hand_7|PF13499.2|0.013,EF-hand_7|PF13499.2|4.5e-05,EF-hand_7|PF13499.2|11,EF-hand_7|PF13499.2|0.01,EF-hand_5|PF13202.2|0.0038,EF-hand_5|PF13202.2|3e-05,EF-hand_5|PF13202.2|5.5e+03,EF-hand_5|PF13202.2|1.7e+02,EF-hand_5|PF13202.2|0.049 S_Transcript_11102:3-1760(+)
GGATTTGCACAAAACGCGGTTTGTCAATGCAGACTATGCAGTTGTAATGTAATAGCTCACAGACTCACAGTCACCAACTTCCCCAAATCCCCAATTCTGTGGTCTAATTCTTCTTTCTTCTTCTATATCAGTCAACTTCTTAACAACACCATAAAAACTACACCTCCTTATCTCTCCCGCTGCTCTTTGCTACAAAATACCCAACCAAATTCCTCTAAAAAATCCATCAAAAAGCTTGTTCATTTCAATTCAATGGTTTCCTCAACACTTGTAAGAAGGACTACCTCAAAACCCTCCATTCATCATCTTCTGCCTTCCATCCAACAGCTCTCAGCTCGCCATCTGTCCTCATCTTCTAACAAAGACCCAAACTTTTCATCATCAACTTCTGAGTTCAGTAGTGGTGACAGATCATCATGGCTGTTGAGATTGGTTTCTGGGGTTGCTGTTGGGTCAAGCTTGGGGGCTTTGTATTATACCTCTTCATCATCTAATGATAATGATAATAAAGTTTGTTCATTTTCTGTTTTTGATTCATTAAAGGGCAAATCTTGTTTTGCTGACTGCTCATCTGCTCCTACAGAAGCTGTTACTACTACTTTGGATTCTGTCACTCATGCTCTCTCTTATAAGAAACCCAGGTTTCTCTTTCAAGATGCATATAGGAGGAAAATTTTCTTCAATTATGAAAAACGCATAAGGTTGCGAAGTCCTCCAGAGAAGGTATTTGAGTACTTTGCATCCACTCGAAATCTTGGAGGAGAAGTACTAATGACACCAGAAGATTTGATGCGCGCCGTTGTCCCTGTTTTTCCTCCATCTGAATCTCATCTAGTCCGAGATGGGTCCCTGCCTGGGGAGAGGCGCCCAGGCGAGTTACGGTGTTCTCCTTCCGAGTTCTTTATGCTCTTTGATGTGAACAATGATGGGCTCATATCTTTTAAAGAGTATATATTCTTTGTTACCCTTCTCAGCATTCCGGAATCAAGCTTCTCTGTGGCATTTAAGATGTTTGATATTGATAACAATGGAGAGATTGACAGGGAGGAATTCAAAAAGGTGATGGCTCTGATGAGAGATCAAAACAGACAAGGAGCCACTCACCGAGATGGACTCCGAGCTGGAACTAAAATAGGAGGTGCAGTTGAAAATGGTGGCGTGGTTGAGTACTTCTTTGGTGAGGATGGTGAGAAACGCTTGCAACATAACAAATTTGTCGAATTCTTGAGGCGTCTACAAGAGGAAATATTGAGATTGGAGTTCGCCCATTATGATTATGAATCACAAGGGACTATATCAGCCAAGGATTTTGCTCTTTCCATGGTTGCTTCTGCTGACATAAAGCATATAAACAAGTTGCTTGATCGGGTTGAAGAATTAGACAATGACTCACATCTTAGCAGCATACGGATTTCAGAAGATGAATTCCGCAAATTTGCGGAGCTGCGTAAAAAGTTGCAGCCTTTTGCATTGGCATTGTTTGCTTACGGCAAAGCTAATGGTTTATTGACAAGGACTGACTTTCAAAGAGCTGCATCTCAGGTTTGTGGTGTTTCCCTCACGGACAATGTGGTCGATATCATTTACCATGTGTTCGATTCAAACCGTGATGGAAGTTTGACTGGTGACGAGTTTCTGAGAGTTATGGAGAAACGAGAGAGGGACATTGCTCAACCTGTAGAGACTGGCATGTTTGGCTTTCTATCATGCTGCTGGAATTGCACAAACAACCGCCCCCTCTCCCGGCTATTTTCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_11102.p1 GENE.S_Transcript_11102~~S_Transcript_11102.p1 ORF type:5prime_partial len:586 (+),score=113.96,EF-hand_8|PF13833.2|2e+03,EF-hand_8|PF13833.2|0.0042,EF-hand_8|PF13833.2|0.0067,EF-hand_8|PF13833.2|1.2e+03,EF-hand_8|PF13833.2|1.7e-12,EF-hand_1|PF00036.28|9e-05,EF-hand_1|PF00036.28|4.4e-07,EF-hand_1|PF00036.28|40,EF-hand_1|PF00036.28|5.2e+02,EF-hand_1|PF00036.28|6.3e+03,EF-hand_1|PF00036.28|0.0012,EF-hand_6|PF13405.2|0.0055,EF-hand_6|PF13405.2|5.4e-06,EF-hand_6|PF13405.2|23,EF-hand_6|PF13405.2|3.1e+03,EF-hand_6|PF13405.2|4.2e+02,EF-hand_6|PF13405.2|0.0019,EF-hand_7|PF13499.2|0.013,EF-hand_7|PF13499.2|4.5e-05,EF-hand_7|PF13499.2|11,EF-hand_7|PF13499.2|0.01,EF-hand_5|PF13202.2|0.0038,EF-hand_5|PF13202.2|3e-05,EF-hand_5|PF13202.2|5.5e+03,EF-hand_5|PF13202.2|1.7e+02,EF-hand_5|PF13202.2|0.049 S_Transcript_11102:3-1760(+)
GFAQNAVCQCRLCSCNVIAHRLTVTNFPKSPILWSNSSFFFYISQLLNNTIKTTPPYLSRCSLLQNTQPNSSKKSIKKLVHFNSMVSSTLVRRTTSKPSIHHLLPSIQQLSARHLSSSSNKDPNFSSSTSEFSSGDRSSWLLRLVSGVAVGSSLGALYYTSSSSNDNDNKVCSFSVFDSLKGKSCFADCSSAPTEAVTTTLDSVTHALSYKKPRFLFQDAYRRKIFFNYEKRIRLRSPPEKVFEYFASTRNLGGEVLMTPEDLMRAVVPVFPPSESHLVRDGSLPGERRPGELRCSPSEFFMLFDVNNDGLISFKEYIFFVTLLSIPESSFSVAFKMFDIDNNGEIDREEFKKVMALMRDQNRQGATHRDGLRAGTKIGGAVENGGVVEYFFGEDGEKRLQHNKFVEFLRRLQEEILRLEFAHYDYESQGTISAKDFALSMVASADIKHINKLLDRVEELDNDSHLSSIRISEDEFRKFAELRKKLQPFALALFAYGKANGLLTRTDFQRAASQVCGVSLTDNVVDIIYHVFDSNRDGSLTGDEFLRVMEKRERDIAQPVETGMFGFLSCCWNCTNNRPLSRLFS*

Click here to download the sequence:
Link to NCBI Protein BLAST