Transcript Information: S_Transcript_111024.p1


Annotated TAIR IDAT2G07690.1
Annotated Gene NameMinichromosome maintenance (MCM2/3/5) family protein
Annotated Gene Symbol(s)MCM5
Annotation TypeOrtholog
Chromosome Positionchr2:3523379-3527388 | Reverse length=727
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.801083772687
Replicate 29.6399184542587
Replicate 38.8016698864518
Condition 2: 8 Hour
Replicate 110.953874090075
Replicate 211.200470385299
Replicate 315.910658680441
Condition 3: 24 Hour
Replicate 11.9884809419267
Replicate 25.2165079961164
Replicate 35.7397370232709


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_111024.p1 GENE.S_Transcript_111024~~S_Transcript_111024.p1 ORF type:5prime_partial len:769 (+),score=160.65,MCM|PF00493.19|2.1e-138,MCM_N|PF14551.2|1.5e-17 S_Transcript_111024:2-2308(+)
GACTTTCTCACCATTCCCACCACCACCACTAATACTACTCGCCTTCATCCTTCACCCTCTTCACTTCATCTTCACTTTCACTTGACTAAGCAAATCAAATCAATCGTAAAGATGTCGGGATGGGATGAAGGAGCTGTGTACTACAGCGACCAAGCTCAGTTCCCACCTGGCCGCAATGGCGACATTAATCCTGAACAGGCAGCCAGCCGCCACTCTATCCTCGTCAAATTCAAGGAATTCATTAGGGGTTTCGAAACTGAAAAAAACATCTTCCCTTATCGCGAGAGTCTGGTTCACAACCGTCCTTCTCTGCTTGTTAATCTCGAACATCTCGATGCCTTTGATCCCGATCTCCCTTCCAAGCTCCGCTCTTCTCCTGCCGACTTCCTCCCTCTTTTTGAGACTGCTGCTGCTCAAGTGTTGGCCAGTTTGAAGTCCAAAGTGGCCAGTGAGACTGGGGAGATGGAAGAGCCTTTAACTGACGATGTTCAGATTCTCCTCACCTCTAGGGAGGATCCCATCTCTATACGCTCTCTTGGGGCTCAATATATATCAAAACTTGTGAAAATATCTGGAATAACAATAGCTGCTTCAAGGACCAAAGCCAAGGCCACTTATGTCACCTTAGTCTGTAAGAATTGTAGAAATGTCAAGTTGGTTCCTTGCCGTCCTGGTCTTGGTGGTGCTATCATTCCTCGCTCTTGTGACTTTGTTCCTCAGGCTGGTGAAGAATCTTGCCCTATTGATCCATGGCTAGTTGTTCCTGACAAAAGCAAGTATGTTGATCAACAAACTCTCAAACTCCAAGAGAATCCTGAGGATGTTCCAACTGGGGAGCTCCCTAGAAATATGCTTCTATCAGTGGATAGACATCTTGTACAAACCATTGTTCCCGGCACAAGGCTCACCGTCATGGGCATTTATAGTATTTTTCAAGCTTCTAATTCGACTTCTCATAAGGGAGCAGTTGCTATTAGACAACCCTATATAAGAGTGGTCGGTATAGAAGAAGCTAACGAGGCCAACACCCGTGGTCAATCTGCTTTCACAGCTGACGAGATTGAAGACTTCAAGAAATTTGCAGCCCAGCCTGATGCATACCAAAGCATATGCTCCAAGATTGCTCCCTCTATATATGGTCATGATGATGTGAAGAGGGCTGTTGCTTGCCTTTTGTTTGGAGGAGCAAGAAAGACTTTGCCAGATGGTGTTAGATTACGAGGTGATATCAATGTGCTGCTACTGGGAGATCCCTCTACTGCCAAATCACAGTTTCTCAAGTTTGTTGAGAAGACGGCTCCTGTAGCTGTTTATACTTCGGGTAAAGGATCATCAGCTGCTGGTCTTACAGCTTCTGTGATTCGGGACAGTGGATCGCGTGAATTTTATTTGGAAGGGGGAGCCATGGTTCTGGCTGATGGAGGTGTTGTTTGCATTGATGAGTTTGATAAAATGAGAGCAGAGGACAGGGTTGCAATTCATGAAGCCATGGAACAACAGACAATATCCATTGCAAAAGCAGGAATAACAACTGTTCTAAATTCTAGAACCTCTGTGCTTGCAGCTGCCAACCCTCCATCAGGGCGCTATGACGATTTGAAGACTGCACAGGATAACATTGACTTGCAGACAACTATTCTTTCTAGGTTTGATTTAATCTTCATTGTAAAGGATATCAGGATGTACCAGCAAGATAAGATAATTGCTAGCCATGTCATTAAGGTTCATGCATCAGCTGAAGCCGCTTCCGGTGACTCTAAAACATCAAAATTGGAGAATTGGCTGAAACGGTATATTCATTACTGTAGAACTGAATGCCATCCTCGTCTGTCAGAATCAGCTGCAAAGAAGTTGCAGACTGAGTACGTTAGTATTAGGCAGAATATGAGGCAGCAGGCAAATGAAAGTGGGGAAGCAGCTGCAGTACCAATCACTGTGAGGCAGCTGGAGGCTATAATACGGTTAAGCGAGTCACTCGCGAAGATGAGATTGTCACACGTTGCAACAGATGAGCATGTTAAGGAGGCGATAAGGCTCTTCAATGTTTCCACTATGGATGCAGCACGGTCTGGAATTAATCAACAAATCAATCTTACTCCTGAGATGGCAAATGAGATAAAGCAAGCAGAAGTACAGATAAAGAGAAGAATTGGTATTGGCAGCCACATATCAGAAAGACGATTAATAGATGACCTTGCCCGAATGGGAATGAATGAATCCATTATAAGAAGGGCACTACTGATAATGCACCAGCGAGATGAAGTTGAGTACAAGAGAGAAAGACGACTAATTGTTCGTAAAGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_111024.p1 GENE.S_Transcript_111024~~S_Transcript_111024.p1 ORF type:5prime_partial len:769 (+),score=160.65,MCM|PF00493.19|2.1e-138,MCM_N|PF14551.2|1.5e-17 S_Transcript_111024:2-2308(+)
DFLTIPTTTTNTTRLHPSPSSLHLHFHLTKQIKSIVKMSGWDEGAVYYSDQAQFPPGRNGDINPEQAASRHSILVKFKEFIRGFETEKNIFPYRESLVHNRPSLLVNLEHLDAFDPDLPSKLRSSPADFLPLFETAAAQVLASLKSKVASETGEMEEPLTDDVQILLTSREDPISIRSLGAQYISKLVKISGITIAASRTKAKATYVTLVCKNCRNVKLVPCRPGLGGAIIPRSCDFVPQAGEESCPIDPWLVVPDKSKYVDQQTLKLQENPEDVPTGELPRNMLLSVDRHLVQTIVPGTRLTVMGIYSIFQASNSTSHKGAVAIRQPYIRVVGIEEANEANTRGQSAFTADEIEDFKKFAAQPDAYQSICSKIAPSIYGHDDVKRAVACLLFGGARKTLPDGVRLRGDINVLLLGDPSTAKSQFLKFVEKTAPVAVYTSGKGSSAAGLTASVIRDSGSREFYLEGGAMVLADGGVVCIDEFDKMRAEDRVAIHEAMEQQTISIAKAGITTVLNSRTSVLAAANPPSGRYDDLKTAQDNIDLQTTILSRFDLIFIVKDIRMYQQDKIIASHVIKVHASAEAASGDSKTSKLENWLKRYIHYCRTECHPRLSESAAKKLQTEYVSIRQNMRQQANESGEAAAVPITVRQLEAIIRLSESLAKMRLSHVATDEHVKEAIRLFNVSTMDAARSGINQQINLTPEMANEIKQAEVQIKRRIGIGSHISERRLIDDLARMGMNESIIRRALLIMHQRDEVEYKRERRLIVRKA*

Click here to download the sequence:
Link to NCBI Protein BLAST