Transcript Information: S_Transcript_111034.p1


Annotated TAIR IDAT1G19290.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:6666249-6668963 | Forward length=904
E-Value7.6E-145
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.5484001646907
Replicate 24.0641980763843
Replicate 34.1415266994752
Condition 2: 8 Hour
Replicate 14.7514466145191
Replicate 23.9641345835305
Replicate 33.7396223868388
Condition 3: 24 Hour
Replicate 15.1354638381397
Replicate 23.8170630023322
Replicate 34.7346644760481


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_111034.p1 GENE.S_Transcript_111034~~S_Transcript_111034.p1 ORF type:5prime_partial len:570 (+),score=94.87,PPR_2|PF13041.2|0.00073,PPR_2|PF13041.2|3.6e-18,PPR_2|PF13041.2|1.9e-15,PPR_2|PF13041.2|3.6e-11,PPR_2|PF13041.2|3.2e-14,PPR_2|PF13041.2|5.4e-07,PPR_2|PF13041.2|3.3e-08,PPR_2|PF13041.2|4.1e-10,PPR_2|PF13041.2|0.63,PPR_2|PF13041.2|2.3e-13,PPR_2|PF13041.2|3e-06,PPR_2|PF13041.2|1.4e-17,PPR_2|PF13041.2|2e-18,PPR_2|PF13041.2|8.6e-08,PPR_1|PF12854.3|4.6e-12,PPR_1|PF12854.3|2.8e-11,PPR_1|PF12854.3|4.8e-06,PPR_1|PF12854.3|0.00023,PPR_1|PF12854.3|7.1e-09,PPR_1|PF12854.3|19,PPR_1|PF12854.3|8.2e-07,PPR_1|PF12854.3|0.0013,PPR_1|PF12854.3|3.4e-05,PPR_1|PF12854.3|8.5e-07,PPR_1|PF12854.3|8e-10,PPR_1|PF12854.3|5e-13,PPR_1|PF12854.3|8.2e-12,PPR|PF01535.16|3.6e-09,PPR|PF01535.16|1.7e-07,PPR|PF01535.16|0.00069,PPR|PF01535.16|5e-07,PPR|PF01535.16|0.0096,PPR|PF01535.16|1.1,PPR|PF01535.16|8.7e-05,PPR|PF01535.16|1.3,PPR|PF01535.16|1e-05,PPR|PF01535.16|8.4e-06,PPR|PF01535.16|1.5e-06,PPR|PF01535.16|6.2e-09,PPR|PF01535.16|1.1e-07,PPR|PF01535.16|1.4e+03,PPR_3|PF13812.2|8.3e-06,PPR_3|PF13812.2|2.1e-05,PPR_3|PF13812.2|3.2,PPR_3|PF13812.2|1.2,PPR_3|PF13812.2|1.8,PPR_3|PF13812.2|21,PPR_3|PF13812.2|0.45,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|1.8,PPR_3|PF13812.2|0.028,PPR_3|PF13812.2|0.0064,PPR_3|PF13812.2|0.071,PPR_3|PF13812.2|0.00031,PPR_3|PF13812.2|39,MRP-S27|PF10037.5|8.5,MRP-S27|PF10037.5|53,MRP-S27|PF10037.5|2,MRP-S27|PF10037.5|0.039,MRP-S27|PF10037.5|4.6e+02,MRP-S27|PF10037.5|2.7,RPM2|PF08579.7|1.7,RPM2|PF08579.7|57,RPM2|PF08579.7|12,RPM2|PF08579.7|3.5,RPM2|PF08579.7|9.5e+02,TPR_12|PF13424.2|3.4e+03,TPR_12|PF13424.2|7.4e+03,TPR_12|PF13424.2|4e+02,TPR_12|PF13424.2|17,TPR_12|PF13424.2|2.4e+02,TPR_12|PF13424.2|46,TPR_12|PF13424.2|1.7 S_Transcript_111034:2-1711(+)
AAAGAGGTAGTAGTGCGTATGGTGGATTGGGGTTTGAAACTTGATTGCTATAGTTTCAGTACTTTGATTGATGGGTATTGTAGAGAAGGCAGTATGAGTGAGGCTTTTACTCTTTTTGACAAGATGATGGATGAAGGGATTAAACCTAGTGTTGTAACTTATAATATTCTTCTTAAAGGTCTGTGTAGTGGAGGAAGGTTGGATGATGCCTTGTATGTTTGGAAATCGATGCTGAAAAGAGGAGTGACACCAAATGAGGTTGGGTACTGTACTATGCTTAATGGTTTCTTCAATGTGGGAAAGTTAGATGAGGCATATAGATTGTGGAAAGAGTTTTTAGCAAAGGGGCTAGTGAAAAGTAGTATTGCTTTTAACACAATGCTAAATGGACTATGTAAAATTGGAGCAATCATTGAAGCAGAGAATATCTTTCAGAAGATGATAGAACTAGGGTGTTATCCTGATGGGATAACATATAGAATCCTTTGTGATGGCTATTGTAGAGTCGGAGATGTCGAACAGGCATTTAGGGTCAAGAATTTGATGGAAAAGGATGCGATTGTTCCCTCTATTGGGATGTACAATTCTCTTATCCGTGGTCTTTTTGTCTGTGGGAAATCATCTCAGGTGGCAGGTCTTGTTACTGAGGTGCATGAAAGGAATCTGACCCCAGATATTTTTACCTATGGTTCGCTGATTGCTGGTTGGTGTAAAGAAAAGATGCTGGATAAAGCATTGAGTGCATATAATGACTTGTTGGAGGAGGGTCTCAAACCAAATGTAATTATTTGCTGCACATTGGTCAGTGGTCTTTACAAGCTTGGAAGGATTGATGAAGCCAGCTTCTTTTTGCAAAAAGTTGTTGACATGGACATATCTTCTAGCAGCGAATCATTTGAGGAATTCTGTTTATCAGATAAAAGACATTTAGATGCAAAGAATATTATTAATTCAATTGATTCCAGTGCTAAAGGCTCACTGCTTTGCAACAACGTTATCTATAATTTAGCTATACTAGGGCTTTGCAAATCTGGAAAGGTTGATCATGCAATTGAAATGTTCTCAGATTTATTGGAGAGAGGATTTGTGCCAGATAATTTTACTTACTGTACTCTTATTCATGGCTACTCAGTTGCTGGTGATGCTAATAAAGCTTTTAACTTACGTGATGACATGCTGAAGAAGGGTCTGGTTCCCAATATTGCTATCTATAATGCGCTTATTAGTAGCCTGTGTCGATCCAGAAATCTTGATCGTGCAGTAAAACTTTTCCACAAACTTAAACTGAAGGGCCTAAGTCCTAATCTTATTACCTACAACATTTTGATTAGTGGATACTGCAGACTTGGCAATACTAGTGAAGCCATAAAGCTCAAAGACAAAATGGGAGAAGAAGGATTTGTTCCTTCAGCTGTAACCTACTCGACCTTGATTAGTGGGCTATGCAAGCAAGGAGATGTGGAGAAATCACTTGATCTCCTGCATCAGATGAGGAATGTGCATAAAGACACTGACCTCAGGACATACCAAGCATTAGCCCAGAATTACCTCAGATTTCACGATATAGAGAAAATATTTATGCTTCACAGGACCATAAAAAGAAGGCTTCACTTTTTTGGCATTAAATACGGCGAAGAAGATGAGTCAGGAAAATCTGTCACATGTGAAGGAATCCCTGAGGTATTGAACACAAAAGAAGCTGTATGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_111034.p1 GENE.S_Transcript_111034~~S_Transcript_111034.p1 ORF type:5prime_partial len:570 (+),score=94.87,PPR_2|PF13041.2|0.00073,PPR_2|PF13041.2|3.6e-18,PPR_2|PF13041.2|1.9e-15,PPR_2|PF13041.2|3.6e-11,PPR_2|PF13041.2|3.2e-14,PPR_2|PF13041.2|5.4e-07,PPR_2|PF13041.2|3.3e-08,PPR_2|PF13041.2|4.1e-10,PPR_2|PF13041.2|0.63,PPR_2|PF13041.2|2.3e-13,PPR_2|PF13041.2|3e-06,PPR_2|PF13041.2|1.4e-17,PPR_2|PF13041.2|2e-18,PPR_2|PF13041.2|8.6e-08,PPR_1|PF12854.3|4.6e-12,PPR_1|PF12854.3|2.8e-11,PPR_1|PF12854.3|4.8e-06,PPR_1|PF12854.3|0.00023,PPR_1|PF12854.3|7.1e-09,PPR_1|PF12854.3|19,PPR_1|PF12854.3|8.2e-07,PPR_1|PF12854.3|0.0013,PPR_1|PF12854.3|3.4e-05,PPR_1|PF12854.3|8.5e-07,PPR_1|PF12854.3|8e-10,PPR_1|PF12854.3|5e-13,PPR_1|PF12854.3|8.2e-12,PPR|PF01535.16|3.6e-09,PPR|PF01535.16|1.7e-07,PPR|PF01535.16|0.00069,PPR|PF01535.16|5e-07,PPR|PF01535.16|0.0096,PPR|PF01535.16|1.1,PPR|PF01535.16|8.7e-05,PPR|PF01535.16|1.3,PPR|PF01535.16|1e-05,PPR|PF01535.16|8.4e-06,PPR|PF01535.16|1.5e-06,PPR|PF01535.16|6.2e-09,PPR|PF01535.16|1.1e-07,PPR|PF01535.16|1.4e+03,PPR_3|PF13812.2|8.3e-06,PPR_3|PF13812.2|2.1e-05,PPR_3|PF13812.2|3.2,PPR_3|PF13812.2|1.2,PPR_3|PF13812.2|1.8,PPR_3|PF13812.2|21,PPR_3|PF13812.2|0.45,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|1.8,PPR_3|PF13812.2|0.028,PPR_3|PF13812.2|0.0064,PPR_3|PF13812.2|0.071,PPR_3|PF13812.2|0.00031,PPR_3|PF13812.2|39,MRP-S27|PF10037.5|8.5,MRP-S27|PF10037.5|53,MRP-S27|PF10037.5|2,MRP-S27|PF10037.5|0.039,MRP-S27|PF10037.5|4.6e+02,MRP-S27|PF10037.5|2.7,RPM2|PF08579.7|1.7,RPM2|PF08579.7|57,RPM2|PF08579.7|12,RPM2|PF08579.7|3.5,RPM2|PF08579.7|9.5e+02,TPR_12|PF13424.2|3.4e+03,TPR_12|PF13424.2|7.4e+03,TPR_12|PF13424.2|4e+02,TPR_12|PF13424.2|17,TPR_12|PF13424.2|2.4e+02,TPR_12|PF13424.2|46,TPR_12|PF13424.2|1.7 S_Transcript_111034:2-1711(+)
KEVVVRMVDWGLKLDCYSFSTLIDGYCREGSMSEAFTLFDKMMDEGIKPSVVTYNILLKGLCSGGRLDDALYVWKSMLKRGVTPNEVGYCTMLNGFFNVGKLDEAYRLWKEFLAKGLVKSSIAFNTMLNGLCKIGAIIEAENIFQKMIELGCYPDGITYRILCDGYCRVGDVEQAFRVKNLMEKDAIVPSIGMYNSLIRGLFVCGKSSQVAGLVTEVHERNLTPDIFTYGSLIAGWCKEKMLDKALSAYNDLLEEGLKPNVIICCTLVSGLYKLGRIDEASFFLQKVVDMDISSSSESFEEFCLSDKRHLDAKNIINSIDSSAKGSLLCNNVIYNLAILGLCKSGKVDHAIEMFSDLLERGFVPDNFTYCTLIHGYSVAGDANKAFNLRDDMLKKGLVPNIAIYNALISSLCRSRNLDRAVKLFHKLKLKGLSPNLITYNILISGYCRLGNTSEAIKLKDKMGEEGFVPSAVTYSTLISGLCKQGDVEKSLDLLHQMRNVHKDTDLRTYQALAQNYLRFHDIEKIFMLHRTIKRRLHFFGIKYGEEDESGKSVTCEGIPEVLNTKEAVC*

Click here to download the sequence:
Link to NCBI Protein BLAST