Transcript Information: S_Transcript_111049.p1


Annotated TAIR IDAT2G24490.1
Annotated Gene Namereplicon protein A2
Annotated Gene Symbol(s)RPA2, ATRPA2, ROR1, ATRPA32A, RPA32A
Annotation TypeHomolog
Chromosome Positionchr2:10398651-10400416 | Reverse length=279
E-Value8E-37
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.831268452676
Replicate 26.0410019026529
Replicate 33.9520148750573
Condition 2: 8 Hour
Replicate 18.1239582160507
Replicate 26.7914540513456
Replicate 314.591205205791
Condition 3: 24 Hour
Replicate 10.65014534198197
Replicate 25.9357601747577
Replicate 32.1018370337597


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_111049.p1 GENE.S_Transcript_111049~~S_Transcript_111049.p1 ORF type:5prime_partial len:168 (+),score=32.87,RPA_C|PF08784.7|2.4e-16 S_Transcript_111049:2-505(+)
AGAAAACAAATGGAGGCTATAGAAAATGGGATGTATGTTTTTCTTGTGGGTCACTTGAGGACCTTCAAAGGCAACACCGAAATCCTTGCATTTAACGTCAGGCCTGTGAGTAATTTCAATGAGGTTACCTTCCATTATGTAGAATGCATTCATCAACATATGCTAAACAAGAAACTGCAGAGAGGTGACTCACTCCCTCAGAGTCAGATGCACGAATCTTCACAGAGCACTCCAATTAAAACTGAATCCAATGGTTTGCATTCATCTCCACCAAATCAGTTCTCTATGCACATGAATGTAGATGGGCTAAAAGACATTGACCAAAGGGTCCTTGATTATCTACGGCAACCTTCAAGCCTCGCTCAAGAACAGGGTGTACACCAGGATGAAGTTGCTGAACATTTGAAGCTTCCTAAGGAGAAAATCATGGAATCGCTCAAATGCCTGGAGGATGAAGGCTTGGTATACTCGACAGTTGATGAAGTTCACTTCAAGGCTACTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_111049.p1 GENE.S_Transcript_111049~~S_Transcript_111049.p1 ORF type:5prime_partial len:168 (+),score=32.87,RPA_C|PF08784.7|2.4e-16 S_Transcript_111049:2-505(+)
RKQMEAIENGMYVFLVGHLRTFKGNTEILAFNVRPVSNFNEVTFHYVECIHQHMLNKKLQRGDSLPQSQMHESSQSTPIKTESNGLHSSPPNQFSMHMNVDGLKDIDQRVLDYLRQPSSLAQEQGVHQDEVAEHLKLPKEKIMESLKCLEDEGLVYSTVDEVHFKAT*

Click here to download the sequence:
Link to NCBI Protein BLAST