Transcript Information: S_Transcript_111058.p1


Annotated TAIR IDAT5G49530.1
Annotated Gene NameSIN-like family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:20100934-20104242 | Forward length=689
E-Value6.5E-167
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.2174995369395
Replicate 23.796417949248
Replicate 34.8903164791494
Condition 2: 8 Hour
Replicate 15.5945311692338
Replicate 25.7428440795913
Replicate 36.4939676765528
Condition 3: 24 Hour
Replicate 13.3583812418544
Replicate 23.6121448633671
Replicate 34.1621709385029


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_111058.p1 GENE.S_Transcript_111058~~S_Transcript_111058.p1 ORF type:complete len:709 (+),score=158.84,Sin_N|PF04801.9|5.5e-78,Sin_N|PF04801.9|0.00017 S_Transcript_111058:65-2128(+)
ATGGACTTCGATGATCTAGACGACCCAGTCAAGGCACCGTCAAAACCCTCAAGATTCGCACCGAAACCCAAATTCCAACCAGGAGCTAAAAAGGTTCCAGCAAAACCTAAACCGGAGCCCGAACCGAAACCTGAACCAGCGGTTCAGCATGGCGGCGCTCCTCCTATACAACCGCCGGTGGTGGTCAAGATGGAAGACGGCTCGGCCGGTTCTATGTCGACCGAACTGGAGCCAATGGTGGAAGATATGAAAGATTCGGTTTCGCCGTTATTATTGGAGGACTTAATGGAGGAAGAGAAAGTGGTGGATGAGGTCGTTGAAGAGGAAGATGTTATTGTTGCTCAGTATGATGTTTTCTTTAACCCTAGCGATGATGATACTCAGTTGTATGTGTTGCAATATCCGCTTAGGCCGTCGTGGCGACCGTATGAGTTGGACCAAAGATGTACGGAGGTGAGAGTGAGACCGAGTACCGCGGAGATGGAGGTGGATATGTCAATAGATATGGATTCTGATAACTTTGATCCTCATTCGCCTTCTGCTGACAAAATGAAGAAGCAGACTTTGTCTTCTCTGTGGAGGCCGCCTCAAGGTACTGGATATGCTGTTGGTGTTTTGAAGGGTAAGAAGGTATACTTGAACCCTATACGTGCAGTTGTGCAGCTTCGTCCATCAGTGGACTTTCATGATTCTGGGAGTTCAAAGAAGAGAAGTATACCTGACGTTACAGTTAAAGCTGACGGTTCCAGTAGCGTGGTCCCTGCTGGGTCATCAAGGAAGCAGAATCAGCAAATGGTCCCAGAAGAAGTGGAGTCATGGATCCCGCTCAAGTATTACAGCTCGACCTCTGACCTCTCAGAAAGATATCTATGGAAGATGGTTACAGAAGAAAACAGTTCATTAGTGTTTCCAATGAACCCGTATGATTACTTGAACTCCTTGTGTCCTGCATCAGCAATCAACAAGATGAAATCAAGAAGGCCTTCTAAAAGATACCTGCTTTCCCTGCCGCTGGAGGAACGGCTAAAGACATGGCTTGTTGAGGGACCAGCTGTTCAGCGATTTAGTGTCCTCAAATACCTTACCCCAGATGATCCCGACGAACATGTTTTACAAGTCCTTCAACGCCATGCTCGTCTAGTACAAGGACACTGGGTGGCAAAGCCTTTGGTCCGAAACCCCAAGGCGCAGAATTCTGAACAATTTGTTAGAGACTATGCTCTTCTTCTATTCAGCCAAAGTCCAGTCGTGAAAGATTCAAAGTTAGATGCCCTGGGATCTCAGAAATCTAGTGCGAAAGCAATACTTCGTGAAATAGCAGTGGAGAGAGTATATTGTAAAGATTGGAAGTTCAAAGAGCCTACAGATGTTTCGTTTATGAAGCTTTATCCCCATGTTGTTGAGGAACAGAGGATACTATGGGAAGAGATTGAGAAAATGATAAATGAAGTTTTTGCTAGCCGTCGCCGTAAAATTGGAGTTAGTTCAGAAAGTTTTAAACGGCCTGAGAAGCTTGGGAAACCTGATTCTGTCAATACCGGTGAAGGCTCATTTAAAGCTACTAATGGAGCACACTCAGTAAAGATGTCCATGTCCAAAGAAACTCGAGAAGCCCTACCAAAGGTTTTGAGAAAGCTTTTCCAAACTCATAAGGTTTGCAGCTTTCAGACAATCTGCCAAGGCCTGCGGGACATGGCTGTTTCCATGTCCACCCTTCCAAAGGCGGACGCAAGAGCTGTGGTGGCAGCAGCATTGAGTGTTGATGGTCCTCCAGAGGAGCTTCAGGCAGTTATCAATGAAGTTGCTGTAAATGTTCATGGTGCCTATGTTTTGAAGTCATCTTTGGAACATCCAGAATATAATCCATTCAGGAATGTAGTTATTGAGATGTTTCTTGGAACTGGACCTAATGCAAAGCTTAAGAGAAGTGAAATTGTTGAAGCTGCCAAGATTAAACTTCAAAGGGAACCCACTAATACTGAATTTCAGAAGGTCATCACTGAAATATGTGTATCAAAAGGAGGGGCTTGGCTGTTGAAAAGCGCTGATGGAGCTCCAAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_111058.p1 GENE.S_Transcript_111058~~S_Transcript_111058.p1 ORF type:complete len:709 (+),score=158.84,Sin_N|PF04801.9|5.5e-78,Sin_N|PF04801.9|0.00017 S_Transcript_111058:65-2128(+)
MDFDDLDDPVKAPSKPSRFAPKPKFQPGAKKVPAKPKPEPEPKPEPAVQHGGAPPIQPPVVVKMEDGSAGSMSTELEPMVEDMKDSVSPLLLEDLMEEEKVVDEVVEEEDVIVAQYDVFFNPSDDDTQLYVLQYPLRPSWRPYELDQRCTEVRVRPSTAEMEVDMSIDMDSDNFDPHSPSADKMKKQTLSSLWRPPQGTGYAVGVLKGKKVYLNPIRAVVQLRPSVDFHDSGSSKKRSIPDVTVKADGSSSVVPAGSSRKQNQQMVPEEVESWIPLKYYSSTSDLSERYLWKMVTEENSSLVFPMNPYDYLNSLCPASAINKMKSRRPSKRYLLSLPLEERLKTWLVEGPAVQRFSVLKYLTPDDPDEHVLQVLQRHARLVQGHWVAKPLVRNPKAQNSEQFVRDYALLLFSQSPVVKDSKLDALGSQKSSAKAILREIAVERVYCKDWKFKEPTDVSFMKLYPHVVEEQRILWEEIEKMINEVFASRRRKIGVSSESFKRPEKLGKPDSVNTGEGSFKATNGAHSVKMSMSKETREALPKVLRKLFQTHKVCSFQTICQGLRDMAVSMSTLPKADARAVVAAALSVDGPPEELQAVINEVAVNVHGAYVLKSSLEHPEYNPFRNVVIEMFLGTGPNAKLKRSEIVEAAKIKLQREPTNTEFQKVITEICVSKGGAWLLKSADGAPK*

Click here to download the sequence:
Link to NCBI Protein BLAST