Transcript Information: S_Transcript_111113.p1


Annotated TAIR IDAT5G52950.1
Annotated Gene Nameunknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21473887-21476939 | Reverse length=948
E-Value1.1E-172
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.6337987934087
Replicate 23.2292295128386
Replicate 32.8443119500248
Condition 2: 8 Hour
Replicate 14.3572506738346
Replicate 25.2083773355749
Replicate 35.1509808554277
Condition 3: 24 Hour
Replicate 13.7338013038933
Replicate 23.0945675924482
Replicate 33.2208897570384


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_111113.p1 GENE.S_Transcript_111113~~S_Transcript_111113.p1 ORF type:complete len:1018 (+),score=187.74 S_Transcript_111113:101-3055(+)
ATGGCGGACCACCGAAACCCCAACTCCTTACCACCACCCAACTACTCCAAAACCGAACGAATAGTCCTCTTAATCGACCTAACCCCACTTCTCCATCTCCAAAACCCTAACTCTTACCTCACTTCCATCCTTTCTTCTTCCAAAACCCTCCTCTCTTTCCCTCCTCTATCATCTTCTCTCTCCTCCTTCAAACTCTTCTTCTCTTCTCTTTCCCCTCTCCTATCCTCCTCCTCTCTTCCCTCCACGAATTCCATCTCTTTCAATCATTCCCACCAAACCCTAAGTTCTCTCTCCCAAACCCTAAATTCCCTAATTCATTCCAGCCTTGCAGGTTCGGGATCAGTGTCAAAGGCGGGGTTTACGTCGAGCTCCATGGCCCAGGTAATTCATGACTATGCTTGGGATTTGTTTGATTCTGATTCGAATGTGGATGATGGTTTGTTGGGTTTTGCTAGGGTTAGGTCGAATTTGGTTGTTTTGTTCTCTCCTGTTTGTAGATCTTTTAATGATTTGTGTAGTTTTATGGATCTTGATGGTAAAGATGCTTTGTTGAGTGATAATTTTAGGGATAAGTTTGGGAGTGTTTTTGGGAGTGTGAAGGATGCTTTTGTTAGTAGGGATATTCATCTTAGCTGGGTTGATGTCAGATTTGAGATTGAAAATGGTGAATTAAGTAGTGATTCTGAGTGTGAGAGGTTGTTTAGGAGCACGGTTAAGGGTTTGGGGTGGGGGTATTGTTCGACCAATTCGATTGTCTTGGGTTCTGCTCTCGTTTCGTTTGGTCTTATTTATCCTATGATGCTTGGGGTTTTGTCGATTTGTTATGCTAATAGTTCTGTTGCTGTGAGAAAGAAAGTTTCTGGACAATTGAATCTTGAGATATTGGATGTGAGTGGGAAACCTTTGGAATGTAAGTATTGTGATCTCGAACTGCTTGATATTAAGACAGTGAAAGGGGTTAGGCCTAACGGACTGTCACAACTATTGGAGAGCGGTACAGTGGGACCGGAAATTGTGCGCCAATGTGGCGGAGTTTTGGAGTGTTTTGGTGATGGGCCAGTGAAGATTGATGTGAAATCTCTATGTAGAAGCAATAAGCTTAACAAGATTGAGTGGCATGCTTCTGATGTGGTACTAGTAAATGAGATGACTGTAGATTCAAAGAAAAATAAAGAGGAATCTTCTAGAAATTTCTTTGCCGACAGAGTTATTGACCTGCTTCTGAAAGAAGCAGACTGGTCTGTCAAGTGGAAATCACCACCTCTTTGGCCGATTCTTTTAAGCTTTCTGTATAGGAGAGGTTACTGGGCTTTGTTGTCTTTGACAAATGCTGATTGTAGCAGCACGACTATGGGTGTACTTAAGCCTTTTACTATTCATTCAGCCGTTCTTTTCATTCCAAAAAATGATACGAATTCTCACTGTGGCACACAATTTGATCTAAGTGGACTGAATCTGTGCGAGTCAAAAGTAGAGACAGGTGAAAATGTTGATTCTGTAATACAAGGGGGTGAAAGTAGAAGAAAACATAAAAAGCATCCTCATAGGGTTAAGGATCTCTCTTGGAGCTCGTTCTGCAAATCGGCTTATGAACACTGTGATATCGAACTTGAGGAAGTGTACTTTTCCAAGGCGGGTGATACTGCAAAGAAGTTAAAATTTCTGAAATGCTGGATGAAACAAGTGGTGCAAAACTGCTCATTTCTTTCTAGTAAACCAGACATTCGAAAGACTCATTCACAGGATGGAGAGAAAACTGCAGAGAGATTAAGCCAATTGCAGCAAGAAAGCGAGCAGCCACTTCCTACCTTGGTTGAAGGAATTGCTGAGAAGGGGATATACATAGAGGAAGCTACAGCTTATTCACCAGAAGCTGCAGAAGCTTTCTTCAGCAATCTATCTGAGAGAATCCAACATGGACTTCAATCAGGAGTTGACTTGGTGGCGTTTTCCCAACGGGTTGTGTGCTCATGTGTATACTGGCTAAAATGGAAGCTAGGAGCAGATACCCTTGAAGAAGGTCAAGCCTCTATTGAGAAATCTGATTGTAGCACCAGTGGGGGACTAGTGGCCGGCGAGCTCATCAAATTACTGCTTAAGGATCCGAAACAGTTAGCAGGAAAGCACAAAGATAACGGTCCTTCCTCCAAAGAGCACAACAAAAAGCCATTAAAAATCTCTTCTGAAGATAGAGTTAGAGAATATGAACTGCAGATTTTGTTTCGAATGGAGATACTTCAATCAGAAGCTGCAGTTGGCATTAGAGATTCCATTAAGCACAAATTTGTCAAGCAAATTTGCTCTCTATTAGAGTTTATTCAATGTAACATGGAAGATGGATTTTTTGGAGACTTCAATCTTACTGATTATGTGGGCAGGACGATCAGAAGCAGGTATTCACAGAATCTTCCAAGCATTGTGCACAGAATCTATGAGCAAATGGATCTTCTTCTGTTTGATGATGAGGATGAGTCCCCTAATCCTTTTCTCAACAGTGAAGACAGCAGTCAGTCATGGAGGATAGGGGATAATGATAGAGGAAGCGAACCTAATTCAACAGATGATTCATTTTCTGGACCTTCAAGATATAATGAACAAAGTCAGAAAGAAAATGAGAGAGCTACTTATGATAGAAAGCTGGTTGAAGCTCAAGAGAGGAGAGAGAGGGCACTAAGGTTTGCATCTTTTACAAGAAGAGCCAATCCAGAATTGCAGAGAGTTTGGGCACCAAAGCCACCAAAGCTTACCAGGTCACAGTCAGACTCTTTTCGCAGGTCCAAGAGAAAGAGTCGGCGTAGGGAAAGCTATGACATGGTGTGTGAAACCCCTGTGAGCGCAGCTAAGAAATGCTTATTCCCCCGAGAAGAGTGTAGGGAGGATGGGGGAAATTCGACTAGTTCTGTTCACAAGGCTTTGTTTCAAGATGAGTCATTCCATCCAGATTGGAGACCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_111113.p1 GENE.S_Transcript_111113~~S_Transcript_111113.p1 ORF type:complete len:1018 (+),score=187.74 S_Transcript_111113:101-3055(+)
MADHRNPNSLPPPNYSKTERIVLLIDLTPLLHLQNPNSYLTSILSSSKTLLSFPPLSSSLSSFKLFFSSLSPLLSSSSLPSTNSISFNHSHQTLSSLSQTLNSLIHSSLAGSGSVSKAGFTSSSMAQVIHDYAWDLFDSDSNVDDGLLGFARVRSNLVVLFSPVCRSFNDLCSFMDLDGKDALLSDNFRDKFGSVFGSVKDAFVSRDIHLSWVDVRFEIENGELSSDSECERLFRSTVKGLGWGYCSTNSIVLGSALVSFGLIYPMMLGVLSICYANSSVAVRKKVSGQLNLEILDVSGKPLECKYCDLELLDIKTVKGVRPNGLSQLLESGTVGPEIVRQCGGVLECFGDGPVKIDVKSLCRSNKLNKIEWHASDVVLVNEMTVDSKKNKEESSRNFFADRVIDLLLKEADWSVKWKSPPLWPILLSFLYRRGYWALLSLTNADCSSTTMGVLKPFTIHSAVLFIPKNDTNSHCGTQFDLSGLNLCESKVETGENVDSVIQGGESRRKHKKHPHRVKDLSWSSFCKSAYEHCDIELEEVYFSKAGDTAKKLKFLKCWMKQVVQNCSFLSSKPDIRKTHSQDGEKTAERLSQLQQESEQPLPTLVEGIAEKGIYIEEATAYSPEAAEAFFSNLSERIQHGLQSGVDLVAFSQRVVCSCVYWLKWKLGADTLEEGQASIEKSDCSTSGGLVAGELIKLLLKDPKQLAGKHKDNGPSSKEHNKKPLKISSEDRVREYELQILFRMEILQSEAAVGIRDSIKHKFVKQICSLLEFIQCNMEDGFFGDFNLTDYVGRTIRSRYSQNLPSIVHRIYEQMDLLLFDDEDESPNPFLNSEDSSQSWRIGDNDRGSEPNSTDDSFSGPSRYNEQSQKENERATYDRKLVEAQERRERALRFASFTRRANPELQRVWAPKPPKLTRSQSDSFRRSKRKSRRRESYDMVCETPVSAAKKCLFPREECREDGGNSTSSVHKALFQDESFHPDWRP*

Click here to download the sequence:
Link to NCBI Protein BLAST