Transcript Information: S_Transcript_11116.p1


Annotated TAIR IDAT3G49490.1
Annotated Gene Nameunknown protein; Has 722 Blast hits to 186 proteins in 64 species: Archae - 0; Bacteria - 30; Metazoa - 72; Fungi - 48; Plants - 38; Viruses - 0; Other Eukaryotes - 534 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:18344926-18348648 | Reverse length=953
E-Value2.3E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 127.917979591568
Replicate 228.021870981409
Replicate 329.102163128704
Condition 2: 8 Hour
Replicate 137.696570182778
Replicate 238.791059096375
Replicate 337.508352417447
Condition 3: 24 Hour
Replicate 137.26273534328
Replicate 231.809497598314
Replicate 330.635457472774


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_11116.p1 GENE.S_Transcript_11116~~S_Transcript_11116.p1 ORF type:complete len:1244 (+),score=280.50 S_Transcript_11116:295-4026(+)
ATGGGCTCATCTAATTCATATAAGGGGGGAGGGTGGTCTTTATCATCATCATCAAATTTATCAGCATTAGCTCCACCATTTAAGGTTGATAAACCCCTTCCAAAACCCAATTCAACCACCAACCCGTCAATGAACTTCTCTGAGGTGCCTATGTATGGTGCTGTCTTTGATCCTGCTGGCCCCTTTTGGAATGCCTCGTCTTCCTTATTGACCAAGACAATGGGTACGGGTACTAATACCAGCTGTGTAACTTCCCCTAGCATTTATTACCCGGGTTCTCAATCCAGCAATTTGGTTGCATCCGTTTACTATGTTGGGTCGAGTGGTGGCACTGCGTATGACCCCTTTTCGTATGACCTACTGCCACATGGTGTGTCTGCGACTGCGAGTGCTGATGAGGCAGGAAAGGCGTATTATTCTCCGTATGTTTCTCCAACTCCTCCCCCTAAGAGAGATGGGTACTTGGGGTTGGGGGTTGGTTGCGAGGCTGGTTATGATTTGCTGTCTAATTCTGGGTCTGCTAATTTGAATGGATGTGGACCCTCTCAAGTTGATCATACACAAGGCTCGTCTGTTGGCGGGGAGTATAAACCTAAGTGGGGTGATTTTTGGATGGGGGTGAATGATGGCAAGCATGGCAAATGGACAGAATATGCTCAAGGTTTTGGTTCCAGTGTCATTGATGTCTCTGGTTTATCAGGCAGCACTAATCATATATCTGTTGATGGGAACAACAAGAATTATCCTTCTGTTGATGGAAGCAACAAGATTCATCATTTTGGTGATGAACGGGACCAGAGTCATCTAAAGCAAGGAGCTTGCCAATCTCAGGGCTTAGATTCATATAGAAGAATGCCTACTGTCTCGAATAACTGTTTTGATATTTTTGGTGGTGTGCATCCCTTTGGAAGCCTTGGCATGGATCAGCAAGATTGTAAGTCATTGTTTGATCTGAATTCAGGAGGCACCTCTTCTGCTGGCTCAAAAGTGCCAGCTTTTGTTTCTGCGTCCATCTCTAAAGAAAGCCCTCATCTTCAGGAACCAGTTCTGGAATCTGTGACAAATTTATGTGGTTCTCAAAAGGCAAGTGGTTCTTCATTTGAGGAACTCTTCTCTCAAAGTGGCTCTTTCGTGTTTGGTTGTATATCAGGGACAAGTACTTCCCCTATTACTGTGAATAAATCATGTGGGAATAGCTTTTCCCAAACTACACTTTCAGGTACTCTAATGAACTCAATGGGAAGTAACGCTTCTGCTGGTTATGACTTCTCTTATCAAAAGGACCCTCAGGCCCCCCGTGGATTGAAATGCCAATCTGGCATTATAGGCAGAAGGTCCGTTTTATCTGGCATGTCAGTATCCTCGAGCCAAATTGGAGCAACAGTGGATATGCTTGCTGGTAAGGATGCATCTGATTGTGGCAAATTTACACCCCAAGTACCGTATCAATTTAGTTCAGAACTCTTTCACCATGAAACTGATGATGCTGAAGCAATATGTTCTACTGAGAAACTTTCTGGGGGGACTGACGTTCATAATCCTGCTGAGGATTCACCGTGCTGGAAAGGAGCCTCATCTACTCGTTTTTCACCATTTGGAGTCTCTGAAGCCATGGGTCCTGATGTTGTGAAAAGGCTGGATGGATGCGGAAGTTTGAGTTCTCAGGAACTGCAGAATAAGAGTGTCTTTGTGGACACTTCTGATGCTATAGATCCTTCTTTTAAAAGGGTAAGCGAGAGCACTTCCATAAAGAGACCTAGTGATTCTACTTGCGCATCAAAAGATCATGAAGACTCTGGCTCCTTGAACCAGAAACCCTGTCGCTTTGACCTGAATACTGGAACAGGTCTTCAATTTGTTGATGACTGTCGAGTTTATACTGAAGTTTCTAGCTTGCTAAACAAAACAAAAACAGAGTCTGACTCTTGTTTGGCTACTCATGAGATCCTTGAAGATGGTGAACTTTCATGTGCAAGAAAATTATCTGATGCAGCTGCTGCTGAAAATTATGGAAATTGCGCTCCTGTTGCAGCGCATATTTTTTCTGGGGTACCAACAAATATTAGCCATGATCTTTCCAGCTCACCTGCTAGAGATAAGATCATGTCAGAGAACTGCGAATCATCCATGAAAGTTTCAGACCCAAACATTGATATAAATGTGCTTGTAAAAACAATGGCGAATCTGTCAGAATTATTTCGCTGCTACTGCATCAGTACTCCAGCTGCTGTTATGGAGCAGCACTCTATGAAAATTAAGCACATTATCGACAATCTTACTAGTTCTATGCTGGTGATGCCTGGTTCAACAAGTCCAAGGGTAAAGGTTTCTTCTCAAGACACTTCTTTCCAGAAAGCCCGACTTGCTAGTGAGATGGTCTACAATGCTGAAGCAGTTGCTGCTGCCCTTAAGCTTTGCAGAGGAACTGAGGACTCTCTGGATTCAATTTATTTCAAAGATGATGCAAACACACTCGGGGATGATAATATGACAGAGGCTATAAAGAAGATACTTCATGAGAATTTACAGGGGGAGGAGGAAACGGACCTGGATAAACTCCTGTATAAGAATCTCTGGCTTGAAGCAGAAGCTGCACTTTGCTCTGTGACTGCTAAAGCTCGTCTACATCGTATGAAGATTGAGATGGGGAGGACACACACTGGCACAATAGATCTGGTCAAGCCATCAGACTCCAAAATTTCCTCTGATGTGCATGGTGTTGTTGAATTGGAATCCAAGGATAAAGATTCACCATCATTGGTTGTCTGTGATCATGAACCTCCTAAACCAAGTGCCACCAGCATGTGTAATGATACTGCGGCATCTGTTGTAAGAAATTTCCATATCCCCGTTTCACATGAGGCAAGTTTGAAAACCGAAAAATCTGAAGCACCGGGACCTGCAAGAGAAGAAATCTGCTCTCCGTCTCTGAATGGTACTATCCCAGATACTTCTTGTCACAACTCCATTGTTTCTGACACAACCACAACCAACCATGCCAATGATGCTGAGAATTCTGTTACTGCCAGTGCCAGATATCAAATTCTTAAAGGTAGGATTGACAAGTCTGACTCTCTGAAGTGTGAAGGCAAACAATCCCTGGATGAAGAAAATATTCTGCTGGAAAAAGATTATTTGGACCTAGATTCATTTGGCAATAATTCCCACGGTTCAGGCTCTATTACAAATGATGCTGAGATTTCTGTCTTGGCCAGATATCACATTCTTAAGTGTAGAGTTGACAGCTATGATTCTCTGCATTGTGAGGGGAAACCATCATCAGGAGAAGAAAATTATTTGGCTGATAACGTTTCCTTAAACGCAGATAAGCTATTCAATAATTCCCTATTATCTAACTCCATTGGTGTTTCTGATGACAGTGAGGCTTCTGTTATCACTAGGTTCCGTGTCATACAAAGCCATATGAATGCCTTGAACTCTATGAACAACCCGACTCCAGCAGACGATGTAGCTCAAGGACATGGCTGGTCGCAGCAGAAATGCAATGTCATGAGAACCGCATTTGGGCCATACCCAGATTTCTCTGAGGATGAAAATGTGAAAGAACTTGACATCTGTGTCAATGGGGAAGCATCCACGGCTCTATCGTCTAAGGCCACCAACAGGCTGAACAGCAAGATATTTGAAAGCTGGTATGATCAGTATGACAATGACTGTTCGTCGACTGATTGGGAACATATTTCGAAGGAGGATATCAGAAGACAGAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_11116.p1 GENE.S_Transcript_11116~~S_Transcript_11116.p1 ORF type:complete len:1244 (+),score=280.50 S_Transcript_11116:295-4026(+)
MGSSNSYKGGGWSLSSSSNLSALAPPFKVDKPLPKPNSTTNPSMNFSEVPMYGAVFDPAGPFWNASSSLLTKTMGTGTNTSCVTSPSIYYPGSQSSNLVASVYYVGSSGGTAYDPFSYDLLPHGVSATASADEAGKAYYSPYVSPTPPPKRDGYLGLGVGCEAGYDLLSNSGSANLNGCGPSQVDHTQGSSVGGEYKPKWGDFWMGVNDGKHGKWTEYAQGFGSSVIDVSGLSGSTNHISVDGNNKNYPSVDGSNKIHHFGDERDQSHLKQGACQSQGLDSYRRMPTVSNNCFDIFGGVHPFGSLGMDQQDCKSLFDLNSGGTSSAGSKVPAFVSASISKESPHLQEPVLESVTNLCGSQKASGSSFEELFSQSGSFVFGCISGTSTSPITVNKSCGNSFSQTTLSGTLMNSMGSNASAGYDFSYQKDPQAPRGLKCQSGIIGRRSVLSGMSVSSSQIGATVDMLAGKDASDCGKFTPQVPYQFSSELFHHETDDAEAICSTEKLSGGTDVHNPAEDSPCWKGASSTRFSPFGVSEAMGPDVVKRLDGCGSLSSQELQNKSVFVDTSDAIDPSFKRVSESTSIKRPSDSTCASKDHEDSGSLNQKPCRFDLNTGTGLQFVDDCRVYTEVSSLLNKTKTESDSCLATHEILEDGELSCARKLSDAAAAENYGNCAPVAAHIFSGVPTNISHDLSSSPARDKIMSENCESSMKVSDPNIDINVLVKTMANLSELFRCYCISTPAAVMEQHSMKIKHIIDNLTSSMLVMPGSTSPRVKVSSQDTSFQKARLASEMVYNAEAVAAALKLCRGTEDSLDSIYFKDDANTLGDDNMTEAIKKILHENLQGEEETDLDKLLYKNLWLEAEAALCSVTAKARLHRMKIEMGRTHTGTIDLVKPSDSKISSDVHGVVELESKDKDSPSLVVCDHEPPKPSATSMCNDTAASVVRNFHIPVSHEASLKTEKSEAPGPAREEICSPSLNGTIPDTSCHNSIVSDTTTTNHANDAENSVTASARYQILKGRIDKSDSLKCEGKQSLDEENILLEKDYLDLDSFGNNSHGSGSITNDAEISVLARYHILKCRVDSYDSLHCEGKPSSGEENYLADNVSLNADKLFNNSLLSNSIGVSDDSEASVITRFRVIQSHMNALNSMNNPTPADDVAQGHGWSQQKCNVMRTAFGPYPDFSEDENVKELDICVNGEASTALSSKATNRLNSKIFESWYDQYDNDCSSTDWEHISKEDIRRQS*

Click here to download the sequence:
Link to NCBI Protein BLAST