Transcript Information: S_Transcript_111166.p2


Annotated TAIR IDAT1G09280.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763), Serine hydrolase (InterPro:IPR005645); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT2G40760.1); Has 5925 Blast hits to 5912 proteins in 1592 species: Archae - 0; Bacteria - 2946; Metazoa - 156; Fungi - 408; Plants - 229; Viruses - 0; Other Eukaryotes - 2186 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:2998209-3001253 | Reverse length=581
E-Value2E-64
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.5106512267685
Replicate 23.3798315917895
Replicate 34.2379053128274
Condition 2: 8 Hour
Replicate 15.444780506502
Replicate 25.1407652193414
Replicate 35.7144612728248
Condition 3: 24 Hour
Replicate 13.4394071878808
Replicate 23.4719030499936
Replicate 33.5418190015695


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_111166.p2 GENE.S_Transcript_111166~~S_Transcript_111166.p2 ORF type:complete len:235 (+),score=43.19,FSH1|PF03959.9|1.9e-44 S_Transcript_111166:1244-1948(+)
ATGTTGTGTCTTCATGGATTTCGTCAGAATGCCTCTAGTTTCAAAGGAAGGACTGCAGCATTAGCGAAAAAACTTAAAAGCTTGGCCGAGCTTGTTTTTGTTGATGCCCCTCATGAGTTGCCATTTATATACCAACCAACCAACATACTTAATGGTGGAAAACAAAGTCTACCTCAGCATCCACCACCAACAAACTGCAACAAAAAGTACGCATGGCTGGTAGCTCCTGACGTCTTTAGGAAGAAATCAATCGAATGGGAAACGTCTGAGACGCCGTTTGATCCTCTTCAGTATCAGCGGCAAACTGAGGGATTCAGTGAATCATTATCATATCTGAAATCCATTGTCTCTGAGAAGGGGCCATTTGATGGGATGTTGGGGTTTTCACAGGGAGCTGCAATGGCTGCTCTTCTGTGTGCAAAAAGAGCAGACCTCGAATTAGACTTCAGATTTGTTATTTTGTGTTCTGGATTTGCTGTTAACTTGGAAGAATACAGTAAAGGGTCCATTACTTGCCCCTCGCTTCATGTTTTTGGAAATGAGAAGGGACGAGACCGGCAGATATCATCTGATACCAGCAGGGATCTTGCATCTTATTTTGAAGATGGATGTCGAGTGATTATTGAGCATCCATCTGGTCATATAATTCCTACGCAGCCTCCATACATTGAGGAGGTTCGGGATTTTCTTAGGCGTTTTATATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_111166.p2 GENE.S_Transcript_111166~~S_Transcript_111166.p2 ORF type:complete len:235 (+),score=43.19,FSH1|PF03959.9|1.9e-44 S_Transcript_111166:1244-1948(+)
MLCLHGFRQNASSFKGRTAALAKKLKSLAELVFVDAPHELPFIYQPTNILNGGKQSLPQHPPPTNCNKKYAWLVAPDVFRKKSIEWETSETPFDPLQYQRQTEGFSESLSYLKSIVSEKGPFDGMLGFSQGAAMAALLCAKRADLELDFRFVILCSGFAVNLEEYSKGSITCPSLHVFGNEKGRDRQISSDTSRDLASYFEDGCRVIIEHPSGHIIPTQPPYIEEVRDFLRRFI*

Click here to download the sequence:
Link to NCBI Protein BLAST