Transcript Information: S_Transcript_111227.p1


Annotated TAIR IDAT3G08040.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)FRD3, MAN1, ATFRD3
Annotation TypeOrtholog
Chromosome Positionchr3:2566593-2569397 | Reverse length=526
E-Value5.3E-228
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.950541520293
Replicate 221.304755196588
Replicate 315.674658154236
Condition 2: 8 Hour
Replicate 11.195455876729
Replicate 20.68774218241474
Replicate 31.2720126057222
Condition 3: 24 Hour
Replicate 123.859511081951
Replicate 231.844089683222
Replicate 333.47736092831


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_111227.p1 GENE.S_Transcript_111227~~S_Transcript_111227.p1 ORF type:complete len:553 (+),score=111.56,MatE|PF01554.14|0.0023,MatE|PF01554.14|3.3e-12,MatE|PF01554.14|1.8e-11,Polysacc_synt_C|PF14667.2|1.3e+03,Polysacc_synt_C|PF14667.2|1.2e-08,Polysacc_synt_C|PF14667.2|6.7e+03,Polysacc_synt_C|PF14667.2|6.3e+03 S_Transcript_111227:321-1979(+)
ATGGCTGACAATGGTGCATTCCGTTCGACTGATCAGAGCAAGTCGAAGATTCCGCTTTCTGTTTTTGTCAAAGATGCAAGGCATGTGTTCAAGCTGGATTCACTTGGTTTGGAGATATTGCGGATAGCAATCCCAGCAGCAATGGCTCTAGCTGCTGATCCCATTGCCTCTCTTATCGACACTGCCTTTATTGGCCGCATAGGTCCTGTGGAACTTGCGGCTGTTGGAGTTTCCATAGCTATATTCAATCAAGCGTCAAAAGTGACTATATTCCCGCTAGTTAGCATCACCACTTCTTTTGTTGCTGAGGAAGATACAGTGGAGAAAATTTGTAAGAAAGCTCAAGAAGCTGAAAATCATGACCAGGAACAGGGGCCTTCTAAATCAAATACGACTGGTGATTCGGAACAGTTGACCCCCGTAGATGATGATGCTCTTGGGAAGCTTGAAGAAGGTTCGAACCAAAAAGCCAACTCAGATGACTCACTTCCGAAACAAGATGACCAGAAGGAAACATGCAAAACCAAGAACGCTGTTGCGGTTAGCAACAATAAGAAGGATGGTAAAATGAAAAAAGCCAAGCGGCATATCCCATCAGCTTCCACAGCACTTCTTCTTGGCGCGGTGCTTGGTCTTCTTCAGGCTATCTTCCTTATTTTTTCTGCTAAAACGCTTCTTGGAATCATGGGCATAAAACAAGATTCCCCAATGCTAAAACCAGCTCACAAGTACTTGACTCTAAGATCTCTTGGTGCGCCTGCTGTTCTTCTTTCATTAGCCATGCAAGGTGTCTTTCGAGGATTTAAAGATACTAAAACTCCTCTCTATGCAACTGTTGCGGCAGATGGTGCAAATATCATACTGGATGCAATTCTCATGTTTCCCTGTCGTTTAGGTGTCAGTGGTGCAGCCATTGCTCATGTCATTTCACAATACTTGATGTCATTTATACTCCTGTGGAAACTCATGCAGCAAGTTAATCTAATGCCTCCCAGTCTAAAAGATCTACAGTTTAGTCGATTTCTCAAAAATGGTTTCTATTTATTAACAAGGGTCATAGCTGTGACATTTTGTGTGACCTTGGCCGCATCCATGGCTGCAAGACTAGGTCCAAATCCAATGGCTGCATTCCAGATCTGCTTACAAGTTTGGTTGACTTCATCACTTCTGGCTGATGGTCTAGCTGTTGCTGGTCAGGCTATCTTAGCAAGTGCATTTGCTGAGAAGGACTATGCCAAGGCAACTGCTGCTGCTTCCAGGGTATTACAGATGAGCTTTGTTCTTGGTCTGGGGCTAGCTGTCATTGTTGGAGTAGGTTTGCTGTTCGGAGGTAGAATCTTCACAAGAGATGTGAATGTTCTGCACGTCATTAGTATAGGAGTGCCGTTTGTTGCAGCAACTCAACCAATAAACTCAGTAGCATTTGTTTTCGATGGTGTGAATTTTGGAGCATCTGACTTCGCTTACTCTGCATATTCAATGGTGGTGGTTGCTGGAGGCAGCATTACATCATTGTTTATCCTTTCTAAATCCAATGGCTTTGTTGGTATCTGGACTGCTTTAACCATCTACATGGCTCTACGTATGTTTGCAGGAATTTGGAGGATGGGAACAGGAACCGGACCATGGCGTTTTTTGAGAAGTGCAATGTTTTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_111227.p1 GENE.S_Transcript_111227~~S_Transcript_111227.p1 ORF type:complete len:553 (+),score=111.56,MatE|PF01554.14|0.0023,MatE|PF01554.14|3.3e-12,MatE|PF01554.14|1.8e-11,Polysacc_synt_C|PF14667.2|1.3e+03,Polysacc_synt_C|PF14667.2|1.2e-08,Polysacc_synt_C|PF14667.2|6.7e+03,Polysacc_synt_C|PF14667.2|6.3e+03 S_Transcript_111227:321-1979(+)
MADNGAFRSTDQSKSKIPLSVFVKDARHVFKLDSLGLEILRIAIPAAMALAADPIASLIDTAFIGRIGPVELAAVGVSIAIFNQASKVTIFPLVSITTSFVAEEDTVEKICKKAQEAENHDQEQGPSKSNTTGDSEQLTPVDDDALGKLEEGSNQKANSDDSLPKQDDQKETCKTKNAVAVSNNKKDGKMKKAKRHIPSASTALLLGAVLGLLQAIFLIFSAKTLLGIMGIKQDSPMLKPAHKYLTLRSLGAPAVLLSLAMQGVFRGFKDTKTPLYATVAADGANIILDAILMFPCRLGVSGAAIAHVISQYLMSFILLWKLMQQVNLMPPSLKDLQFSRFLKNGFYLLTRVIAVTFCVTLAASMAARLGPNPMAAFQICLQVWLTSSLLADGLAVAGQAILASAFAEKDYAKATAAASRVLQMSFVLGLGLAVIVGVGLLFGGRIFTRDVNVLHVISIGVPFVAATQPINSVAFVFDGVNFGASDFAYSAYSMVVVAGGSITSLFILSKSNGFVGIWTALTIYMALRMFAGIWRMGTGTGPWRFLRSAMFS*

Click here to download the sequence:
Link to NCBI Protein BLAST