Transcript Information: S_Transcript_111357.p1


Annotated TAIR IDAT1G30290.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:10670320-10672740 | Reverse length=806
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.7684312140517
Replicate 24.4873470286471
Replicate 34.2646036222369
Condition 2: 8 Hour
Replicate 15.9380626791048
Replicate 25.4981661911192
Replicate 35.3160588457944
Condition 3: 24 Hour
Replicate 15.3686578070104
Replicate 24.0882662528762
Replicate 33.664219526167


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_111357.p1 GENE.S_Transcript_111357~~S_Transcript_111357.p1 ORF type:complete len:826 (+),score=155.25,PPR_2|PF13041.2|0.0002,PPR_2|PF13041.2|0.0075,PPR_2|PF13041.2|1e-11,PPR_2|PF13041.2|2.9e-13,PPR_2|PF13041.2|1.2e-08,PPR_2|PF13041.2|1.3e-09,PPR_2|PF13041.2|1.2e-14,PPR_2|PF13041.2|3.6e-19,PPR_2|PF13041.2|1.6e-08,PPR_2|PF13041.2|0.82,PPR_2|PF13041.2|3.7e-05,PPR_2|PF13041.2|3.2e-12,PPR_2|PF13041.2|0.12,PPR_2|PF13041.2|0.0016,PPR_2|PF13041.2|0.73,PPR_2|PF13041.2|3.1e+03,PPR_1|PF12854.3|3.4e+03,PPR_1|PF12854.3|82,PPR_1|PF12854.3|0.00079,PPR_1|PF12854.3|2.6e-10,PPR_1|PF12854.3|0.087,PPR_1|PF12854.3|3.6e-08,PPR_1|PF12854.3|0.00022,PPR_1|PF12854.3|6.4e-13,PPR_1|PF12854.3|9.9e-08,PPR_1|PF12854.3|3.1e-06,PPR_1|PF12854.3|0.062,PPR_1|PF12854.3|4.2e-07,PPR_1|PF12854.3|1.1e-06,PPR_1|PF12854.3|2.1e-05,PPR_1|PF12854.3|4.2,PPR|PF01535.16|0.032,PPR|PF01535.16|0.0023,PPR|PF01535.16|0.11,PPR|PF01535.16|3.2e-06,PPR|PF01535.16|1.9,PPR|PF01535.16|2.1e-05,PPR|PF01535.16|3.3e-05,PPR|PF01535.16|2.8e-07,PPR|PF01535.16|0.0038,PPR|PF01535.16|8.4e-06,PPR|PF01535.16|0.51,PPR|PF01535.16|4.4e-05,PPR|PF01535.16|5.9e-06,PPR|PF01535.16|0.0073,PPR|PF01535.16|1.5,PPR|PF01535.16|13,PPR|PF01535.16|2.7e+03,PPR_3|PF13812.2|0.35,PPR_3|PF13812.2|2.3,PPR_3|PF13812.2|74,PPR_3|PF13812.2|0.054,PPR_3|PF13812.2|13,PPR_3|PF13812.2|1.6,PPR_3|PF13812.2|19,PPR_3|PF13812.2|0.0001,PPR_3|PF13812.2|1.7,PPR_3|PF13812.2|0.08,PPR_3|PF13812.2|1.6e+03,PPR_3|PF13812.2|5,PPR_3|PF13812.2|0.0083,PPR_3|PF13812.2|1.4,PPR_3|PF13812.2|4e+03,PPR_3|PF13812.2|5.9,Clathrin|PF00637.16|2e+02,Clathrin|PF00637.16|0.029,Clathrin|PF00637.16|2.1e+02,Clathrin|PF00637.16|11,Clathrin|PF00637.16|2.4,ATP13|PF12921.3|1.3e+02,ATP13|PF12921.3|2.7e+02,ATP13|PF12921.3|1.1e+03,ATP13|PF12921.3|2.4e+03,ATP13|PF12921.3|2.2e+03,ATP13|PF12921.3|3.8,ATP13|PF12921.3|5,AEP1|PF17049.1|86,AEP1|PF17049.1|4.1e+02,AEP1|PF17049.1|3.7e+02,AEP1|PF17049.1|0.95,AEP1|PF17049.1|3,AEP1|PF17049.1|3e+02,DUF3368|PF11848.4|6.2e+03,DUF3368|PF11848.4|8e+03,DUF3368|PF11848.4|3.4,DUF3368|PF11848.4|45,DUF3368|PF11848.4|0.56,DUF3368|PF11848.4|6.7e+03 S_Transcript_111357:307-2784(+)
ATGCCTGTCAAAGAACTCATCTGTAAGTTCAGGAGGACATCAGCACATCAATCGCCTGGTAATCTGTTCACTGCTTATTTTCCGTCACTTTCATATTCTGATTCCAGATCTCAATCAAACCATCATTTGGTGAATGAGAAACATGATATTGGCAGAAGTGATCAACAATATTCTAGGAACAAGCAACTGGGTTCCAAGAAAAATTCATATTTGAGGTCTAATTTGGTAAGATCATGGCGGCAGAACAAAGGTTTTGCTAAAAGAGGTGATGGGTTTGATGGACATCAGCTTGTGGGTTCCACTAAAAATCGTAGGTTGGGTTCTTTTGGGAATTCCTTCAAGAATCTGCAAAATGAAGAAGTTTCACATAGTGAAGGACTAGATAAAGCTGATGTTGTTATTGATGATGGATTTAGGCTTTTGGACGAATATAATGAGGGTCGGCAAAGTCAGTGTGGTATAAGATATGAGAAGAATGAGGATGAATTTAGGCATCCATTGGTTAAAGAAACATGTAGGCTAATTGCAGAGAGATCAAAGTGGAACCCTGACCATGAAGAGCAATTAAGACATTTACTGAGAAGCCTCAAGCCCCGTCAAGTTTGTGCAGTCTTGCACTTGCAGGCTGATGAACGGGTAGCATTGGAGCTCTTTTATTGGGCTGATAGGCAATGGCGGTATCGCCATGACCCTGTTGTTTACTATGCCATGCTTCAAGTGCTAAGCAAGACTAAACTGTTTCAGGGTGCTAGGAGGGTGCTCCATCTCATGCGCAGGAGGGGTGTCCAGTGCAGTCCAGCGGCATTCAGTTATTTGATGATTTCTTATAGCAGGGCTGGAAAATTAAGGCATGCAATGAGCGTTCTCACTATGATGCAAAAATCTGGGGTTCAACCTAACCTGTGTATATGTAACACTACCATCCATGTTTTAGTTATGGCCAACAGGCTGGACAAAGCTTTGAAATTCCTTGAGAGGATGCAAATTGTCGGAATATTACCTGATATTGTTACATATAACTGCTTGATTAAGGGTTATTGTTGTATGCTAAGAGTGAAAGATGCCATAGCTTTGATTGATGATATGCCTCTTAGGGGATGTGCCCCTGATAAAGTTAGTTTCTATACTGTAATGGCCTACTTCTGTAAGGAGAACAACATGCCTGAATTAAAGGGATTACTTAAGAAAATGATGGACCATAACTTGCAGCCAGATATGGTCACATATAATAATCTCATACATATGCTTTGCAAACATGGCCACAGTGATGAGGGTTGTGAATTTCTACGAGAAGCACAGGAGCAAGGATTTCGAGTGGATAAAGTTGGTTACACTGCTGTAGTTCATTTATTATGTCAGGAAAGAAAGATAGACAAGGCAAAAGAGATTGTGCATGAGATGTTAGAAAAGGGTTGCCTTCCAGATGTAGTGACTTATACTGCTCTTCTAGATGGGTTTTGCCGGGTGGGGAATGTAGATGAAGCTAAGATTATCCTTCAGCAAATGTATAAAAATGGCTGTAAACCAAACACTGTATCATATACAGCCTTGCTAAATGGCCTTTGTCGAACTGGGAGCTCATCTAAGGCTCAAGAGATGATGAATATGAGCGAGGAAGATTGGTGGATGCCAAATGCCATCACATATAGTGTTTTGATGCATGGTTTCCTTAGAGAAGGAAAGTTGCTTGAGGCATGTGATGTTGTCAGGGAGATGATTACAAAGGGCTTTCTTCCATCTCCTGCTGAGGTCAACTTGTTGCTTTTATCACTTTGTCGAGAAGGAAGAACAAATGAGGCTAAAAGGTTCATGGAAGAGTGTCTAAACAAAGGATCTGATGTTAATGTCATAAACTTTACAACTGTCATTCACGGATATTGTCAAAACGATGATTTAGAAGGTGCTCTTTCTTTACTTGATGACATGTATTTGGTCAACAAACGGCCTGATGTTATGACATATACAACCATAGTTGATGCATTGGGTAAAAGGGGTAAAATTGAAGAGGCAAATGATGTCATAAAGAAGATGTTAGGGAGGGGTATACTTCCTACTCCTGCTACATATCGGTCCATCATTCATCGTTACTGTCAGAATGGTAGGGTGGAAGATCTGTTGAAGCTGTTGGAAAAGCTGCTCCCTAAGCAGCCATACAACACTGCCTACAATCGAGTTATTGAAAAGCTTTGTAGTTTTGGATGCATAAGTGAGGCTTATAGAATTTTAGGTGAAGTTCTGAGAACAGCTTCGAGAATTGATGCTCACACTTGCCATGTACTTATTCAAAGTTGTTTAAGAAGAGGAAATCCTCTTTTAGCATACAAAGTTGCTTGTAGAATGTTTAACCGGAATTTAATACCTGACTTAAGGCTATGTAAGAAGGTGAGCAAGAGGCTGAGGTTAGATGGAAGCATCAAAGAGGCTGATAATCTTATGATGCGGCTTGTTGAGCATGGTCTCATATCTCCTTTGGGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_111357.p1 GENE.S_Transcript_111357~~S_Transcript_111357.p1 ORF type:complete len:826 (+),score=155.25,PPR_2|PF13041.2|0.0002,PPR_2|PF13041.2|0.0075,PPR_2|PF13041.2|1e-11,PPR_2|PF13041.2|2.9e-13,PPR_2|PF13041.2|1.2e-08,PPR_2|PF13041.2|1.3e-09,PPR_2|PF13041.2|1.2e-14,PPR_2|PF13041.2|3.6e-19,PPR_2|PF13041.2|1.6e-08,PPR_2|PF13041.2|0.82,PPR_2|PF13041.2|3.7e-05,PPR_2|PF13041.2|3.2e-12,PPR_2|PF13041.2|0.12,PPR_2|PF13041.2|0.0016,PPR_2|PF13041.2|0.73,PPR_2|PF13041.2|3.1e+03,PPR_1|PF12854.3|3.4e+03,PPR_1|PF12854.3|82,PPR_1|PF12854.3|0.00079,PPR_1|PF12854.3|2.6e-10,PPR_1|PF12854.3|0.087,PPR_1|PF12854.3|3.6e-08,PPR_1|PF12854.3|0.00022,PPR_1|PF12854.3|6.4e-13,PPR_1|PF12854.3|9.9e-08,PPR_1|PF12854.3|3.1e-06,PPR_1|PF12854.3|0.062,PPR_1|PF12854.3|4.2e-07,PPR_1|PF12854.3|1.1e-06,PPR_1|PF12854.3|2.1e-05,PPR_1|PF12854.3|4.2,PPR|PF01535.16|0.032,PPR|PF01535.16|0.0023,PPR|PF01535.16|0.11,PPR|PF01535.16|3.2e-06,PPR|PF01535.16|1.9,PPR|PF01535.16|2.1e-05,PPR|PF01535.16|3.3e-05,PPR|PF01535.16|2.8e-07,PPR|PF01535.16|0.0038,PPR|PF01535.16|8.4e-06,PPR|PF01535.16|0.51,PPR|PF01535.16|4.4e-05,PPR|PF01535.16|5.9e-06,PPR|PF01535.16|0.0073,PPR|PF01535.16|1.5,PPR|PF01535.16|13,PPR|PF01535.16|2.7e+03,PPR_3|PF13812.2|0.35,PPR_3|PF13812.2|2.3,PPR_3|PF13812.2|74,PPR_3|PF13812.2|0.054,PPR_3|PF13812.2|13,PPR_3|PF13812.2|1.6,PPR_3|PF13812.2|19,PPR_3|PF13812.2|0.0001,PPR_3|PF13812.2|1.7,PPR_3|PF13812.2|0.08,PPR_3|PF13812.2|1.6e+03,PPR_3|PF13812.2|5,PPR_3|PF13812.2|0.0083,PPR_3|PF13812.2|1.4,PPR_3|PF13812.2|4e+03,PPR_3|PF13812.2|5.9,Clathrin|PF00637.16|2e+02,Clathrin|PF00637.16|0.029,Clathrin|PF00637.16|2.1e+02,Clathrin|PF00637.16|11,Clathrin|PF00637.16|2.4,ATP13|PF12921.3|1.3e+02,ATP13|PF12921.3|2.7e+02,ATP13|PF12921.3|1.1e+03,ATP13|PF12921.3|2.4e+03,ATP13|PF12921.3|2.2e+03,ATP13|PF12921.3|3.8,ATP13|PF12921.3|5,AEP1|PF17049.1|86,AEP1|PF17049.1|4.1e+02,AEP1|PF17049.1|3.7e+02,AEP1|PF17049.1|0.95,AEP1|PF17049.1|3,AEP1|PF17049.1|3e+02,DUF3368|PF11848.4|6.2e+03,DUF3368|PF11848.4|8e+03,DUF3368|PF11848.4|3.4,DUF3368|PF11848.4|45,DUF3368|PF11848.4|0.56,DUF3368|PF11848.4|6.7e+03 S_Transcript_111357:307-2784(+)
MPVKELICKFRRTSAHQSPGNLFTAYFPSLSYSDSRSQSNHHLVNEKHDIGRSDQQYSRNKQLGSKKNSYLRSNLVRSWRQNKGFAKRGDGFDGHQLVGSTKNRRLGSFGNSFKNLQNEEVSHSEGLDKADVVIDDGFRLLDEYNEGRQSQCGIRYEKNEDEFRHPLVKETCRLIAERSKWNPDHEEQLRHLLRSLKPRQVCAVLHLQADERVALELFYWADRQWRYRHDPVVYYAMLQVLSKTKLFQGARRVLHLMRRRGVQCSPAAFSYLMISYSRAGKLRHAMSVLTMMQKSGVQPNLCICNTTIHVLVMANRLDKALKFLERMQIVGILPDIVTYNCLIKGYCCMLRVKDAIALIDDMPLRGCAPDKVSFYTVMAYFCKENNMPELKGLLKKMMDHNLQPDMVTYNNLIHMLCKHGHSDEGCEFLREAQEQGFRVDKVGYTAVVHLLCQERKIDKAKEIVHEMLEKGCLPDVVTYTALLDGFCRVGNVDEAKIILQQMYKNGCKPNTVSYTALLNGLCRTGSSSKAQEMMNMSEEDWWMPNAITYSVLMHGFLREGKLLEACDVVREMITKGFLPSPAEVNLLLLSLCREGRTNEAKRFMEECLNKGSDVNVINFTTVIHGYCQNDDLEGALSLLDDMYLVNKRPDVMTYTTIVDALGKRGKIEEANDVIKKMLGRGILPTPATYRSIIHRYCQNGRVEDLLKLLEKLLPKQPYNTAYNRVIEKLCSFGCISEAYRILGEVLRTASRIDAHTCHVLIQSCLRRGNPLLAYKVACRMFNRNLIPDLRLCKKVSKRLRLDGSIKEADNLMMRLVEHGLISPLG*

Click here to download the sequence:
Link to NCBI Protein BLAST