Transcript Information: S_Transcript_111594.p2


Annotated TAIR IDAT5G01110.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:42114-44303 | Reverse length=729
E-Value2.2E-140
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1957921811205
Replicate 22.5485070445974
Replicate 32.6781530946483
Condition 2: 8 Hour
Replicate 13.7301837848451
Replicate 23.6917241979747
Replicate 34.0802612577192
Condition 3: 24 Hour
Replicate 11.5860971511322
Replicate 21.2715669861317
Replicate 32.4139910486745


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_111594.p2 GENE.S_Transcript_111594~~S_Transcript_111594.p2 ORF type:complete len:303 (+),score=44.76,PPR_2|PF13041.2|0.62,PPR_2|PF13041.2|4e-21,PPR_2|PF13041.2|4.4e-12,PPR_2|PF13041.2|2e-22,PPR_2|PF13041.2|2.3e-10,PPR_2|PF13041.2|1.5e-14,PPR_2|PF13041.2|1.3e-18,PPR_2|PF13041.2|2e-16,PPR_2|PF13041.2|6.6e-09,PPR_1|PF12854.3|9.1e+02,PPR_1|PF12854.3|9.5e-14,PPR_1|PF12854.3|2.7e-12,PPR_1|PF12854.3|3.6e-15,PPR_1|PF12854.3|1.3e-12,PPR_1|PF12854.3|1.1e-11,PPR_1|PF12854.3|4.2e-10,PPR_1|PF12854.3|1.4e-08,PPR_1|PF12854.3|1.7e-07,PPR|PF01535.16|18,PPR|PF01535.16|3.1e-08,PPR|PF01535.16|1.9e-07,PPR|PF01535.16|7.4e-10,PPR|PF01535.16|3.2e-08,PPR|PF01535.16|4.1e-07,PPR|PF01535.16|2.4e-07,PPR|PF01535.16|2.1e-05,PPR|PF01535.16|4.8e-08,PPR_3|PF13812.2|1.4e+03,PPR_3|PF13812.2|5.7e-06,PPR_3|PF13812.2|2.9e-05,PPR_3|PF13812.2|1e-05,PPR_3|PF13812.2|6.1e-06,PPR_3|PF13812.2|0.0003,PPR_3|PF13812.2|0.0012,PPR_3|PF13812.2|0.0021,PPR_3|PF13812.2|0.0032,MRP-S27|PF10037.5|0.73,MRP-S27|PF10037.5|1.5,MRP-S27|PF10037.5|30,MRP-S27|PF10037.5|0.22,MRP-S27|PF10037.5|0.0002,MRP-S27|PF10037.5|1.2e+03,ATP13|PF12921.3|3.8,ATP13|PF12921.3|30,ATP13|PF12921.3|3.1e+02,ATP13|PF12921.3|3.1e+02,ATP13|PF12921.3|29,ATP13|PF12921.3|21 S_Transcript_111594:1486-2394(+)
ATGACCGAGGCCTTAAGAATACGCGATGAAATGCTTGAGCAAGGTTGTGTTATGGATGTGGTAACTTACAACACCATTTTGGATGGGTTGTGCAAGGAAAACTTACTTTCTGATGCAGATAAGCTTCTTGATGAGATGACTCAAAGAGGTGTCCAGCCTGATTACTATACTTATACAACGCTTATACATGGTTATTGTAAAGCTGCGAACATGAACAAAGCAGTGGTATTGTTTAAGACTATGATTCAGAGGAATCTGAAACCAGATATTGTCACATATAATACTATAATTGATGGTTTCTGCAAGGAGGGTTCCATGGACAAAGCATATGAATTATGGAGAGACATGGTTCATCGTAATATCACCCCTAATCACATTTCTTATAGTATCCTCATTAACGGTTTTTGTAGTACAGGGCACCTCAATGATGCATTCAGGTTGTGGGATGAGATGGTCAATAAAGGTATTGAGCCAACCACTGTGACCTGTAACACCATCATTAAAGGCTATTGCAGATCTGGAGATCCAGCAACAGCAGAGGAGTTCCTCAGCAAGATGACAGTGAAGGGCTTTCTTCCTGATAGCATTACGTACAATACTCTAATTCATGGATTCATAAAAGAAGAGAATATGGACAAAGCTTTTATCTTGCTTAATAAAATGGAGGACCAAGGAATATTTCCCGACGTCATAACATATAATGTGATACTAGAAGGTTTTTGTAGACAAGCTAGAATGGAAGAGGCAAACTTGATATACAAGAAGATGACAGAAAGGGGTATGAATCCCGACAGAACAACATATACATCATTAATCAATGGTTATGTCAGTCAGGACAATCTGAAGGAGGCTTTTAGGTTCCATGATGAAATGCTTAAAAGGGGTTTTGTGCCAGATGATAAATTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_111594.p2 GENE.S_Transcript_111594~~S_Transcript_111594.p2 ORF type:complete len:303 (+),score=44.76,PPR_2|PF13041.2|0.62,PPR_2|PF13041.2|4e-21,PPR_2|PF13041.2|4.4e-12,PPR_2|PF13041.2|2e-22,PPR_2|PF13041.2|2.3e-10,PPR_2|PF13041.2|1.5e-14,PPR_2|PF13041.2|1.3e-18,PPR_2|PF13041.2|2e-16,PPR_2|PF13041.2|6.6e-09,PPR_1|PF12854.3|9.1e+02,PPR_1|PF12854.3|9.5e-14,PPR_1|PF12854.3|2.7e-12,PPR_1|PF12854.3|3.6e-15,PPR_1|PF12854.3|1.3e-12,PPR_1|PF12854.3|1.1e-11,PPR_1|PF12854.3|4.2e-10,PPR_1|PF12854.3|1.4e-08,PPR_1|PF12854.3|1.7e-07,PPR|PF01535.16|18,PPR|PF01535.16|3.1e-08,PPR|PF01535.16|1.9e-07,PPR|PF01535.16|7.4e-10,PPR|PF01535.16|3.2e-08,PPR|PF01535.16|4.1e-07,PPR|PF01535.16|2.4e-07,PPR|PF01535.16|2.1e-05,PPR|PF01535.16|4.8e-08,PPR_3|PF13812.2|1.4e+03,PPR_3|PF13812.2|5.7e-06,PPR_3|PF13812.2|2.9e-05,PPR_3|PF13812.2|1e-05,PPR_3|PF13812.2|6.1e-06,PPR_3|PF13812.2|0.0003,PPR_3|PF13812.2|0.0012,PPR_3|PF13812.2|0.0021,PPR_3|PF13812.2|0.0032,MRP-S27|PF10037.5|0.73,MRP-S27|PF10037.5|1.5,MRP-S27|PF10037.5|30,MRP-S27|PF10037.5|0.22,MRP-S27|PF10037.5|0.0002,MRP-S27|PF10037.5|1.2e+03,ATP13|PF12921.3|3.8,ATP13|PF12921.3|30,ATP13|PF12921.3|3.1e+02,ATP13|PF12921.3|3.1e+02,ATP13|PF12921.3|29,ATP13|PF12921.3|21 S_Transcript_111594:1486-2394(+)
MTEALRIRDEMLEQGCVMDVVTYNTILDGLCKENLLSDADKLLDEMTQRGVQPDYYTYTTLIHGYCKAANMNKAVVLFKTMIQRNLKPDIVTYNTIIDGFCKEGSMDKAYELWRDMVHRNITPNHISYSILINGFCSTGHLNDAFRLWDEMVNKGIEPTTVTCNTIIKGYCRSGDPATAEEFLSKMTVKGFLPDSITYNTLIHGFIKEENMDKAFILLNKMEDQGIFPDVITYNVILEGFCRQARMEEANLIYKKMTERGMNPDRTTYTSLINGYVSQDNLKEAFRFHDEMLKRGFVPDDKF*

Click here to download the sequence:
Link to NCBI Protein BLAST