Transcript Information: S_Transcript_111690.p1


Annotated TAIR IDAT1G24620.1
Annotated Gene NameEF hand calcium-binding protein family
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:8723893-8724453 | Reverse length=186
E-Value6E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1205.03727366727
Replicate 2245.60463847045
Replicate 3265.62179642418
Condition 2: 8 Hour
Replicate 1104.3468784071
Replicate 2129.7285814203
Replicate 3116.6338831216
Condition 3: 24 Hour
Replicate 1209.24375821494
Replicate 2214.66478134578
Replicate 3247.30293853821


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_111690.p1 GENE.S_Transcript_111690~~S_Transcript_111690.p1 ORF type:complete len:159 (-),score=43.04,EF-hand_1|PF00036.28|6.3e-06,EF-hand_1|PF00036.28|0.14,EF-hand_1|PF00036.28|3.9e-05,EF-hand_1|PF00036.28|0.0047,EF-hand_6|PF13405.2|5.4e-06,EF-hand_6|PF13405.2|5.8e+02,EF-hand_6|PF13405.2|40,EF-hand_6|PF13405.2|1.8e-05,EF-hand_6|PF13405.2|0.12,EF-hand_7|PF13499.2|4.1e-11,EF-hand_7|PF13499.2|1.7e-06,EF-hand_5|PF13202.2|1.6e-05,EF-hand_5|PF13202.2|2.2,EF-hand_5|PF13202.2|1.1,EF-hand_5|PF13202.2|0.012,EF-hand_8|PF13833.2|0.069,EF-hand_8|PF13833.2|1.3e-05,EF-hand_8|PF13833.2|12,EF-hand_8|PF13833.2|0.0074,SPARC_Ca_bdg|PF10591.5|0.12,SPARC_Ca_bdg|PF10591.5|0.21 S_Transcript_111690:235-711(-)
ATGGCACAGCTCGGAGCCGATCTCTCAGCTGAATTGGAGAACCTAAGCCATGTGCTGAGCCTAATGCAAGCCTTCAATGCCTTCGACTCGGACAATGATGGGCGCATTAATGCAGCCGAGCTAGCCGGGATCATGGGATCACTGGGGTACAAGCTGACTGATGACGAGGTTCGAGCCATGATGAGCCAAGCTGGCACCAGCAGGGATGGGCGGCTAAGCTTAGCCGAGTTCTTGGAGCTGAATACCAAAGACATGGAGCTGGGGAGCTTAGCCACCATCCTAAAATCAGCGTTTGAATCAATCGATGTTGATGGAGATGATGTGATCACAGGGGAAGAGCTCTTCCAAGTAATGAGAGAAATGGGGGTTGGGTTTTCTTTTGATGATTGTCAAGAGATTGTAGCCTCTATGGATGGGAATGGGGATGGTGCTGTTACCTCTCAAGAGCTTAAGCTTCTGATTGATTCCCTTGTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_111690.p1 GENE.S_Transcript_111690~~S_Transcript_111690.p1 ORF type:complete len:159 (-),score=43.04,EF-hand_1|PF00036.28|6.3e-06,EF-hand_1|PF00036.28|0.14,EF-hand_1|PF00036.28|3.9e-05,EF-hand_1|PF00036.28|0.0047,EF-hand_6|PF13405.2|5.4e-06,EF-hand_6|PF13405.2|5.8e+02,EF-hand_6|PF13405.2|40,EF-hand_6|PF13405.2|1.8e-05,EF-hand_6|PF13405.2|0.12,EF-hand_7|PF13499.2|4.1e-11,EF-hand_7|PF13499.2|1.7e-06,EF-hand_5|PF13202.2|1.6e-05,EF-hand_5|PF13202.2|2.2,EF-hand_5|PF13202.2|1.1,EF-hand_5|PF13202.2|0.012,EF-hand_8|PF13833.2|0.069,EF-hand_8|PF13833.2|1.3e-05,EF-hand_8|PF13833.2|12,EF-hand_8|PF13833.2|0.0074,SPARC_Ca_bdg|PF10591.5|0.12,SPARC_Ca_bdg|PF10591.5|0.21 S_Transcript_111690:235-711(-)
MAQLGADLSAELENLSHVLSLMQAFNAFDSDNDGRINAAELAGIMGSLGYKLTDDEVRAMMSQAGTSRDGRLSLAEFLELNTKDMELGSLATILKSAFESIDVDGDDVITGEELFQVMREMGVGFSFDDCQEIVASMDGNGDGAVTSQELKLLIDSLV*

Click here to download the sequence:
Link to NCBI Protein BLAST