Transcript Information: S_Transcript_111775.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value2E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.070661824075098
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.16739374322294
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_111775.p1 GENE.S_Transcript_111775~~S_Transcript_111775.p1 ORF type:complete len:261 (-),score=29.43,RVT_1|PF00078.23|6.7e-23 S_Transcript_111775:772-1554(-)
ATGGTTAGTGAGATCTTGCACAAGATGAAAAGCTGTTGTTCTTCGAGGGGGTTAATGGCAGTAAAGATTGTCATGGCGAAGGCATATGACAAGGTTGAATGGCCTTATCTTCTACAAATCTTGAAATGCTTGGGCTTCTCTCCTCAATTTTTACAGCTAATAAACCAATGTATTGCCACATCAAAGTTCCTAGTTCTAATTAATGGAAGGCCTAGAGGCTTTGAGAAACCAACTCGGGGCCTGCGTCAGGGGGATCCCATGTCGCCATTTCTCTTTGTTATTGCCATGGAAGGATTGTCAAGAATCACCCTCAAGTTTCAAGATGAAGGAAAACTGAAAGACATAGAAATTGATAGGGCTTGCACACATATCAGCCATCTACTATATGCGGACAACCTTGTTTTCTTTGCAATGGCATTAGAAGATAATGTTGTGGCTATCAACCAAGTTTTGGAGATGGTTGAAGGATGGAGTGGGCTAATGTCGAACAAAGCAAAATTTGGGATTTTTTTCAGCTGGTACACAAAGAGAGACATCCGAGCAAAAGTCAAATCAATTTTGGGCTTCAAGGAAATGGCCAGGGATGCTGTGTATTTGGGCCTTTCTTTCTTCAGAAATCAGACTAGATCTCAACGTTTTGTTTTCATCAAGAATAGGATGCTAAACAAGCTCCAGGGTTGGAAATATAAGAATCTCTCATATGCAGCCAGAGCCACCGTCATACAGTCTATCGAATCAGCTCTACTATCGTACGTGATGATGACCAACCTTTTTACGAAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_111775.p1 GENE.S_Transcript_111775~~S_Transcript_111775.p1 ORF type:complete len:261 (-),score=29.43,RVT_1|PF00078.23|6.7e-23 S_Transcript_111775:772-1554(-)
MVSEILHKMKSCCSSRGLMAVKIVMAKAYDKVEWPYLLQILKCLGFSPQFLQLINQCIATSKFLVLINGRPRGFEKPTRGLRQGDPMSPFLFVIAMEGLSRITLKFQDEGKLKDIEIDRACTHISHLLYADNLVFFAMALEDNVVAINQVLEMVEGWSGLMSNKAKFGIFFSWYTKRDIRAKVKSILGFKEMARDAVYLGLSFFRNQTRSQRFVFIKNRMLNKLQGWKYKNLSYAARATVIQSIESALLSYVMMTNLFTK*

Click here to download the sequence:
Link to NCBI Protein BLAST