Transcript Information: S_Transcript_11214.p1


Annotated TAIR IDAT3G52150.1
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:19342074-19343090 | Forward length=253
E-Value2.7E-90
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1120.20703928699
Replicate 2133.03779471011
Replicate 3154.79465005
Condition 2: 8 Hour
Replicate 1181.70510476209
Replicate 2194.72725183043
Replicate 3185.13651908596
Condition 3: 24 Hour
Replicate 1111.92434687316
Replicate 2125.20270440117
Replicate 3108.72873824078


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_11214.p1 GENE.S_Transcript_11214~~S_Transcript_11214.p1 ORF type:complete len:267 (+),score=71.18,RRM_1|PF00076.18|1.7e-17,RRM_1|PF00076.18|6.2e-18,RRM_6|PF14259.2|2.2e-13,RRM_6|PF14259.2|2.4e-12,RRM_5|PF13893.2|0.0062,RRM_5|PF13893.2|5.9e-07,RRM_occluded|PF16842.1|0.066,RRM_occluded|PF16842.1|0.52,RRM_7|PF16367.1|0.16,RRM_7|PF16367.1|0.29 S_Transcript_11214:91-891(+)
ATGGCAAGTATGTCACTGTCCTTTCTTCCATCTCCTAGTCTCTTCAATCACTCTTCAACCCCACAAACACCCACAAAGCCCACATCATTACCCTCCTTACACTGTTTCAATTATTGTAATATATCTTGTCATGGGTTTTCTGGGCTCAAAATGAAGCCCAGAATCTCGAAAAACCCACCTTTGATGATAAGGGTCAGAGCTGCTGTAGCTGAAGAGACTTCATCTCCTCCATCATCTTCTTCTTCGGAATCAAATGAAGAAGCTGCTAGAAGGGTTTACATTGGTAACATTCCTAGGAATATCAACAATGATGAACTCACTCGTATTGTTGAAGAACATGGTGCTGTTGAAAAAGCTGAGGTCATGTATGACAAATATTCTGGAAGGAGCAGAAGGTTTGGTTTTGCTACCATGAAGGCTGTTGAGGATGCCACTGCAGTTGTCGAGAAGTTGAATGGCAAGGAAATCGGAGGACGTCAAATCAAAGCTAATATAACTGAGAAACCTTTGCAAGCTGTGGATTTATCAGCTCTCCAGGCCGATGAATCTCAATTCGTTGACAGTGGGCACAAAGTTTATGTTGGCAATCTTGCAAAGACAGTTACCTCTGATACATTGAAGAGTTTCTTTTCCGAGAAGGGAAATGTTGTCAGTGCAAAGGTTCAACGGGCACCAGGAACCTTGAAGTCTAGTGGATATGGGTTTGTCTGTTTCTCTTCAGATGAGGAGGCAGAGGCTGCAATTACAGCCTTGAACAATGCTGACTTGGAAGGGCAAAAAATACGCGTAAACAAAGCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_11214.p1 GENE.S_Transcript_11214~~S_Transcript_11214.p1 ORF type:complete len:267 (+),score=71.18,RRM_1|PF00076.18|1.7e-17,RRM_1|PF00076.18|6.2e-18,RRM_6|PF14259.2|2.2e-13,RRM_6|PF14259.2|2.4e-12,RRM_5|PF13893.2|0.0062,RRM_5|PF13893.2|5.9e-07,RRM_occluded|PF16842.1|0.066,RRM_occluded|PF16842.1|0.52,RRM_7|PF16367.1|0.16,RRM_7|PF16367.1|0.29 S_Transcript_11214:91-891(+)
MASMSLSFLPSPSLFNHSSTPQTPTKPTSLPSLHCFNYCNISCHGFSGLKMKPRISKNPPLMIRVRAAVAEETSSPPSSSSSESNEEAARRVYIGNIPRNINNDELTRIVEEHGAVEKAEVMYDKYSGRSRRFGFATMKAVEDATAVVEKLNGKEIGGRQIKANITEKPLQAVDLSALQADESQFVDSGHKVYVGNLAKTVTSDTLKSFFSEKGNVVSAKVQRAPGTLKSSGYGFVCFSSDEEAEAAITALNNADLEGQKIRVNKA*

Click here to download the sequence:
Link to NCBI Protein BLAST