Transcript Information: S_Transcript_112144.p1


Annotated TAIR IDAT5G52630.1
Annotated Gene Namemitochondrial RNAediting factor 1
Annotated Gene Symbol(s)MEF1
Annotation TypeOrtholog
Chromosome Positionchr5:21350375-21352141 | Forward length=588
E-Value4E-250
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8750069052059
Replicate 21.303710292035
Replicate 31.1317133505846
Condition 2: 8 Hour
Replicate 14.5074120443031
Replicate 24.9828208333937
Replicate 35.3774070094385
Condition 3: 24 Hour
Replicate 10.99294924957246
Replicate 21.3907338921849
Replicate 31.2037793920624


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_112144.p1 GENE.S_Transcript_112144~~S_Transcript_112144.p1 ORF type:5prime_partial len:440 (+),score=99.86,DYW_deaminase|PF14432.2|2.8e-39,PPR|PF01535.16|0.00077,PPR|PF01535.16|0.0017,PPR|PF01535.16|3.4e+02,PPR|PF01535.16|0.88,PPR|PF01535.16|0.00028,PPR|PF01535.16|0.18,PPR|PF01535.16|0.0018,PPR|PF01535.16|2.7e+02,PPR|PF01535.16|11,PPR|PF01535.16|9.4e+02,PPR_2|PF13041.2|0.0079,PPR_2|PF13041.2|2.2e-06,PPR_2|PF13041.2|34,PPR_2|PF13041.2|1.3e-07,PPR_2|PF13041.2|6.2,PPR_2|PF13041.2|0.3,PPR_2|PF13041.2|2.1e+02,PPR_2|PF13041.2|3.5e+03,PPR_1|PF12854.3|0.018,PPR_1|PF12854.3|0.01,PPR_1|PF12854.3|3.6e+02,PPR_1|PF12854.3|1.2e+03,PPR_1|PF12854.3|1.7e+02,PPR_1|PF12854.3|2.5e+02,PPR_1|PF12854.3|6.2e+02,PPR_1|PF12854.3|0.00029,PPR_1|PF12854.3|65,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|13,PPR_3|PF13812.2|77,PPR_3|PF13812.2|7.7,PPR_3|PF13812.2|1.9,PPR_3|PF13812.2|0.44,PPR_3|PF13812.2|5.5e+02,PPR_3|PF13812.2|49,PPR_3|PF13812.2|5.4e+03 S_Transcript_112144:2-1321(+)
GATGTCTTTGTTGGGAGCTCATTGGTTGATATGTATGCTAAATGTGGGGCGATAACGGATGCACGTAAGGTGTTCGATGAAATGCCGGAGAGAAATGTGGTGTCTTGGAGTGGAATGATTTTCGGGTATGCTCAGTTGGGTGAAAATGAGGAGGCTCTGAGGTTATTTACTCAAGCTTTGGTCGAGGAAGTTGATGTTAATGATTTTACTTTCTCCAGTGTGATACATGTTTGTGGAAATTTGACTCTTTTAGAGTTGGGGAAGCAAATTCATGGGTTGTGCTTGAAGAAGAGCTACGACTCTTCGAGTTTTGTTGGGAGCGGTTTGGTGTCTTTGTACTCCAAGTGTGGGATCATTGAAGGGGCTTATCAGGTGTTCGATGAAGTGCAAGTTAAGAATGTTGGGATATGGAATTCAATGCTGATTGCTTGCGCTCAACACGCGCATACAACAAAGGCATTGGATTTGTTTCATAAGATGGAAGGTTCGGGGACAAAACCCAACTTCATTACTTTCTTGTCTGTGCTTTATGCTTGCAGCCATGCTGGGTTGGTGAAGGAAGGGCAGTTTTACTTTGATTTGATGAACAAGTATGGGATTGAACCAGGGCACCAGCATTATGCTACCTTAGTGGATTTATTAGGTCGTGCTGGGAAGTTGCAGGAGGCTCTTTCAGTGATTAAGGAAATGCCCATCGAACCAACTGAGTCAGTTTGGGGGGCTCTACTTACTGGCTGCAGGCTACATGGGAATACCGAGTTGGCAGCATATGCTGCAGACAAGGTTTTCGAGTTGGGTAATGTGAGTTCTGGCCTTTTTGTGTTATTAAGTAATGCTTATGCTTCAGCTGGTAGACTTGAAGATGCAGCCAAAGCTAGGATGATGCTGAGGGATAGAGGGGTGAAGAAGGAAACAGGTTTAAGCTGGGTCGAGGAAGGAAGCAAAGTTCACACTTTTGCTGCAGGGGATAGGTATCACCCGAAATCAAAGGAGATATATGAGAAATTGGAGGAATTGGGCGATGAAATGGAGCGAGCTGGTTATGTTGCTGACACTAGTTTTGTGTTGCAGCAAGTAGATAATGAGGCTAAGAAACAAGCAATTAGGTACCACAGTGAGAGACTGGCAATTGCTTTCGCTTTGATCAGCTTCCCACCTGAAAGACCCATTCGGATTATGAAAAACTTGCGTGTGTGTGGTGATTGTCACACTGCAATCAAGTTTATGTCAAAGTGCACTGGAAGAACTATTATTGTGAGAGATAACAGCAGATTCCATCGGTTTGAGGATGGTAAATGTTCATGTGGGGACTATTGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_112144.p1 GENE.S_Transcript_112144~~S_Transcript_112144.p1 ORF type:5prime_partial len:440 (+),score=99.86,DYW_deaminase|PF14432.2|2.8e-39,PPR|PF01535.16|0.00077,PPR|PF01535.16|0.0017,PPR|PF01535.16|3.4e+02,PPR|PF01535.16|0.88,PPR|PF01535.16|0.00028,PPR|PF01535.16|0.18,PPR|PF01535.16|0.0018,PPR|PF01535.16|2.7e+02,PPR|PF01535.16|11,PPR|PF01535.16|9.4e+02,PPR_2|PF13041.2|0.0079,PPR_2|PF13041.2|2.2e-06,PPR_2|PF13041.2|34,PPR_2|PF13041.2|1.3e-07,PPR_2|PF13041.2|6.2,PPR_2|PF13041.2|0.3,PPR_2|PF13041.2|2.1e+02,PPR_2|PF13041.2|3.5e+03,PPR_1|PF12854.3|0.018,PPR_1|PF12854.3|0.01,PPR_1|PF12854.3|3.6e+02,PPR_1|PF12854.3|1.2e+03,PPR_1|PF12854.3|1.7e+02,PPR_1|PF12854.3|2.5e+02,PPR_1|PF12854.3|6.2e+02,PPR_1|PF12854.3|0.00029,PPR_1|PF12854.3|65,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|13,PPR_3|PF13812.2|77,PPR_3|PF13812.2|7.7,PPR_3|PF13812.2|1.9,PPR_3|PF13812.2|0.44,PPR_3|PF13812.2|5.5e+02,PPR_3|PF13812.2|49,PPR_3|PF13812.2|5.4e+03 S_Transcript_112144:2-1321(+)
DVFVGSSLVDMYAKCGAITDARKVFDEMPERNVVSWSGMIFGYAQLGENEEALRLFTQALVEEVDVNDFTFSSVIHVCGNLTLLELGKQIHGLCLKKSYDSSSFVGSGLVSLYSKCGIIEGAYQVFDEVQVKNVGIWNSMLIACAQHAHTTKALDLFHKMEGSGTKPNFITFLSVLYACSHAGLVKEGQFYFDLMNKYGIEPGHQHYATLVDLLGRAGKLQEALSVIKEMPIEPTESVWGALLTGCRLHGNTELAAYAADKVFELGNVSSGLFVLLSNAYASAGRLEDAAKARMMLRDRGVKKETGLSWVEEGSKVHTFAAGDRYHPKSKEIYEKLEELGDEMERAGYVADTSFVLQQVDNEAKKQAIRYHSERLAIAFALISFPPERPIRIMKNLRVCGDCHTAIKFMSKCTGRTIIVRDNSRFHRFEDGKCSCGDYW*

Click here to download the sequence:
Link to NCBI Protein BLAST