Transcript Information: S_Transcript_112149.p1


Annotated TAIR IDAT1G51340.2
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:19032021-19034681 | Forward length=515
E-Value4E-127
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.89832915561791
Replicate 21.349833116388
Replicate 30.31126980731815
Condition 2: 8 Hour
Replicate 10.53988329916792
Replicate 20.14159397873245
Replicate 30.3147909983858
Condition 3: 24 Hour
Replicate 10.32260376462903
Replicate 20.33469763931315
Replicate 30.3724774490207


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_112149.p1 GENE.S_Transcript_112149~~S_Transcript_112149.p1 ORF type:3prime_partial len:474 (+),score=64.23,MatE|PF01554.14|0.00042,MatE|PF01554.14|5.2e-15,MatE|PF01554.14|2.4e+03,MatE|PF01554.14|0.48,MatE|PF01554.14|6.6e-05,Polysacc_synt_C|PF14667.2|1.9e+03,Polysacc_synt_C|PF14667.2|5.9e-07,Polysacc_synt_C|PF14667.2|9.6e+02,Polysacc_synt_C|PF14667.2|73 S_Transcript_112149:2814-4232(+)
ATGAGGGGCATATATGCTTCCCTGTCTGTTTGGATGAGCAGAGGCAAGTTGCCCTTCTGGGTTTTCTTCAAGAATTCGAGGGATACTTTTAAGAACGATGAGCTGGGTCTGGAAATAGCTGAGATTGCAGTACCAGCAGCCTTGTCTTTGTTAGCAGATCCAGTTGCCCCCTTGATTGACACAGCTTATATAGGCCATATAGGTCCGGTGGAGCTTGCAGCAGTGGGGGTCGCTATCACTGTTTTTAATCAAGTATCGAGGATCGCAATATTCCCACTTGTAAGTGTTACCACATCTTTTGTTGCCGAGGAAGATGCCTTTGGAAAAGTGAGCATTGGTACATCTGAAACTGGAAAACCAGAGAACGGCTGCAGTAGTGACACTGAAATGGAAGCATTTACAATTAATGCTGAATCTACAGCAAAGTCTTCACATGTCGGTAATAGCTGCAATGAAGTGACCAATGTAAAACAGGAGAGAAGAAACATATCATCAGCATCGTTGGCTATGTTCATTGGTGGTCTTCTTGGTCTCGTACAAGCTTTATTTCTGCTATGTTTAGCGAAGCCAATCCTAACCTATATGGGTGTTGATTCTGAATCTCCGATGCTAAAGCCAGCAAAACAGTATTTGACATTGAGGGCACTTGGTGCTCCAGCTGTTCTTTTGTCTTTGGCAATGCAAGGGGTTTTCCGAGGTTTTAAGGATACAAAAACTCCTCTCTATGCAACTGTTGTGGGAGACGTAACAAACATAATTCTTGATCCAATACTTATATTCATATTTCATATGGGTGTAAGTGGTGCTGCCATTGCCCAAGTTATTTCTCAGTATATAATTTCAATGATCCTCATGTGGAAATTACTTCAACAAGTTAATCTCTTGACCCCGCGTTTACAAGATCTACAATTTAGAAGATTTCTCAAAAATGGATTCTGGTTACTGTTGAGAGTAATAGCTGTCACCTTTTGTGTAACTGTGGGAGCTTCATTAGCTACAAGGCTGGGCTCAATACCAATGGCAGCTTTCCAGATTTGCTTGCAGATCTGGTTAGCAGCTTCTTTGCTTGTTGATGGATTAGCTGTTACTGGACAATTGGGTCTGATTTTTGGAATATTCGTTTCGCTAGTCCTTGTAGTTGTTTTGCGATTTGCATCAAGGTTATTCACTGACGATATCAGTGTCCAGCAGCTGATAAATCTAGGCGCTCCGTTTGTTGCAGCAACTCAGCCGATTAATGCATTAGCATTTGTTTTTGATGGCATCAACTATGGAGCCTCAGATTTTGCATATGCTGCGTACTCCATGGTGTTTGTGTCTGTTCTGAGTATCTTGTGTTTATTGCTGCTGTCTTCATCACACGGTTTTGTGGGCATATGGCTTGCCTTGTCCATATTCATGACTTTGCGCGCATTAGCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_112149.p1 GENE.S_Transcript_112149~~S_Transcript_112149.p1 ORF type:3prime_partial len:474 (+),score=64.23,MatE|PF01554.14|0.00042,MatE|PF01554.14|5.2e-15,MatE|PF01554.14|2.4e+03,MatE|PF01554.14|0.48,MatE|PF01554.14|6.6e-05,Polysacc_synt_C|PF14667.2|1.9e+03,Polysacc_synt_C|PF14667.2|5.9e-07,Polysacc_synt_C|PF14667.2|9.6e+02,Polysacc_synt_C|PF14667.2|73 S_Transcript_112149:2814-4232(+)
MRGIYASLSVWMSRGKLPFWVFFKNSRDTFKNDELGLEIAEIAVPAALSLLADPVAPLIDTAYIGHIGPVELAAVGVAITVFNQVSRIAIFPLVSVTTSFVAEEDAFGKVSIGTSETGKPENGCSSDTEMEAFTINAESTAKSSHVGNSCNEVTNVKQERRNISSASLAMFIGGLLGLVQALFLLCLAKPILTYMGVDSESPMLKPAKQYLTLRALGAPAVLLSLAMQGVFRGFKDTKTPLYATVVGDVTNIILDPILIFIFHMGVSGAAIAQVISQYIISMILMWKLLQQVNLLTPRLQDLQFRRFLKNGFWLLLRVIAVTFCVTVGASLATRLGSIPMAAFQICLQIWLAASLLVDGLAVTGQLGLIFGIFVSLVLVVVLRFASRLFTDDISVQQLINLGAPFVAATQPINALAFVFDGINYGASDFAYAAYSMVFVSVLSILCLLLLSSSHGFVGIWLALSIFMTLRALA

Click here to download the sequence:
Link to NCBI Protein BLAST