Transcript Information: S_Transcript_112167.p1


Annotated TAIR IDAT5G58000.1
Annotated Gene NameReticulon family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:23477416-23479496 | Forward length=487
E-Value1.3E-96
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7410374639838
Replicate 22.0963086651221
Replicate 30.54581306166419
Condition 2: 8 Hour
Replicate 14.9493507122318
Replicate 23.1362404635131
Replicate 35.7107878318642
Condition 3: 24 Hour
Replicate 10.71455226371102
Replicate 21.23556605167
Replicate 32.2786270646367


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_112167.p1 GENE.S_Transcript_112167~~S_Transcript_112167.p1 ORF type:complete len:642 (+),score=115.78,Reticulon|PF02453.13|5.3e-26,Reticulon|PF02453.13|3.1e+02 S_Transcript_112167:276-2201(+)
ATGGAGGGTGGTAAGGGAACCGGAAGAAGAAAGATGATGGTAGGAGCAGGAGGATCAGTTTGGGAGAGTAGAAGGAAAGGTGATCAAAAACTGAATAAACTAAAAGGGAATGGGAGTCCTGATCAGGATAATCAAGATCACAGGCTTAGGCTTAGAATTTCTCCCAAAGCCAGGAATTCAGATTGGGATGGTGGTGGTGATGAGTTGAAGAATGCACCTGCTTCCACTTCTTTGGTTAAATCCAATCGTAGTAATTGTAGTAGCAGCAGCAGCAGCAGCGGTAGTAGCAGAAATGCAGATGATCAGTTGAGAAGTCCTATGAGGTTGAAGAAAACCAGATCTGAGCCCCTTAAGGCTCAGAGTCGGAGTCCTGTGGTATTGAGAAAGGTGAAATCGGAAGTGAAACCAGTAGCAGTCAATGTTAACGAGGAGGAGGAGGAGGAGAATGAGGCGACCTGTGACACAAAAACAAATACTAGTAGCAGTAATTTAAACTGCTACTCTGTCTCTATTAATCATGCTCATGCACTGGGGAAGAATTCCAATTCGGATTCCTATGAGTCAAGTTGCAAGATGAACACCAAGTCCAAGAAGCAGCCGGAATTTGATCCTTTAGGTATTAATATGAATATGAACATTGGTCATCCGGGCAAGATAAATTCCAGTTCCAATTCAGCAGTGCAAGAGTTAGCAGCAGCCACCTGTGACTGTGAAGGAGGAGTAGAAGCTTGTCACCAACCTGATCAAGACCACAAGGTTACTGCAACACCTCATCAGAATCAGGATGATGGAGATGAAAATAATACTAATATTAATGTTCCAGATCATGACGGAGTTGAAAAGGAGGGGCCTGTTAATAATAATGACGAAGAAATCGAGGTAGAGGTGGTGAGAGAGGGCGACAATTCAGGTTCAGGCAAATTGATTAATTCTGTCAAGGAGGAGGAAATCATACCGGAAACCAATAAGGCTACTACTAGTACTAGTAGTATTGCCCAAGTGTCACCTTCCCTGCTGCACAAGTCCCACCGTCAACCTCAGCTCGTTAAAAAATCCACCTCCAAGATTCATGTTTCCAGCCCCAATGCCAGTGCTGATGCTCCGTTGTCTCCACCTAACCAATGTCCTCAAGCTCAAACTCATGGTCGGCTTCAGAGTTTAGTGGATTTAGTCATGTGGCGAGATGTATCCAGATCTGCTTTCGTGTTCGGATTTGGCACCTTTCTCATCATCTCATCCTCCTATGCAAAAGACCTCAACATCAGCATCATTTCTGTGGCGGCTTATTTGGGTCTGGTCTACCTCGCGGCTGTATTTCTGTACAGGTCATTTCAATCCAGAGGGGTCGTAGATGAAAGAGTTTTTCAGTCTCCAGAAATTAATAGTATGCTTGGAGAAGATGAAGCTCTTTGGTTAGTCAAATTGATTCTACCCTACCTCAATGAATCGCTACTGAAATTAAGGGGACTTTTCTCAGGAGATCCTGCTGTCACAATGAAGTTGGCCTTGATGCTGTTCGTATTGGCAAGATGTGGTAGCTACATTACAATATGGAAAATGGTCAAGCTTGGCTTTTTTGGCGTTTTTGTGATTCCCAAACTCTATTCGTCCTACTCCGCCCAAATTACTGCATACGGCAAATTTTGGTTTCGACGTTTCCGAGATGCTTGGCAATCCTGTTCACATAAAAAGATCGTAGCTTTTGCCATCTTCACATTTGTGTGGAATTTTTCCTCAGTAGTTGCTCGTGCGTGGGCAGCCTTCATGCTTTTTGTGGCTTTTCGATACTATCAACAGTCTTTGGGCACAGATGACTGGGTTCAAGAACAAAATGCGCAGTATGGTCTACACCAAAAACATATAGGAAGACAAAAGCGCAAAATACCTAGTCCAGCATATCAAAGGAAAGAGAAGAAAAGTTTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_112167.p1 GENE.S_Transcript_112167~~S_Transcript_112167.p1 ORF type:complete len:642 (+),score=115.78,Reticulon|PF02453.13|5.3e-26,Reticulon|PF02453.13|3.1e+02 S_Transcript_112167:276-2201(+)
MEGGKGTGRRKMMVGAGGSVWESRRKGDQKLNKLKGNGSPDQDNQDHRLRLRISPKARNSDWDGGGDELKNAPASTSLVKSNRSNCSSSSSSSGSSRNADDQLRSPMRLKKTRSEPLKAQSRSPVVLRKVKSEVKPVAVNVNEEEEEENEATCDTKTNTSSSNLNCYSVSINHAHALGKNSNSDSYESSCKMNTKSKKQPEFDPLGINMNMNIGHPGKINSSSNSAVQELAAATCDCEGGVEACHQPDQDHKVTATPHQNQDDGDENNTNINVPDHDGVEKEGPVNNNDEEIEVEVVREGDNSGSGKLINSVKEEEIIPETNKATTSTSSIAQVSPSLLHKSHRQPQLVKKSTSKIHVSSPNASADAPLSPPNQCPQAQTHGRLQSLVDLVMWRDVSRSAFVFGFGTFLIISSSYAKDLNISIISVAAYLGLVYLAAVFLYRSFQSRGVVDERVFQSPEINSMLGEDEALWLVKLILPYLNESLLKLRGLFSGDPAVTMKLALMLFVLARCGSYITIWKMVKLGFFGVFVIPKLYSSYSAQITAYGKFWFRRFRDAWQSCSHKKIVAFAIFTFVWNFSSVVARAWAAFMLFVAFRYYQQSLGTDDWVQEQNAQYGLHQKHIGRQKRKIPSPAYQRKEKKSF*

Click here to download the sequence:
Link to NCBI Protein BLAST