Transcript Information: S_Transcript_112173.p1


Annotated TAIR IDAT5G58000.1
Annotated Gene NameReticulon family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:23477416-23479496 | Forward length=487
E-Value2E-42
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2939870940931
Replicate 20.57213068544609
Replicate 30
Condition 2: 8 Hour
Replicate 12.4885382541873
Replicate 21.8492127724896
Replicate 33.9729699749965
Condition 3: 24 Hour
Replicate 11.2745799119309
Replicate 20.99177133316269
Replicate 32.0439258026836


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_112173.p1 GENE.S_Transcript_112173~~S_Transcript_112173.p1 ORF type:complete len:617 (+),score=120.22,Reticulon|PF02453.13|7.8e-24 S_Transcript_112173:276-2126(+)
ATGGAGGGTGACAAGGGAACCGGAACAACAATGGTGGGGAGAAGAAGAAAGATGGTAGGAGCAGGAGGATCATCAGTTTGGGAGAGTAGAAGGAAAGGTGATCAAAAAGTGAATAAACTAGTTGGTGGTGGTATCAGTATAAAAGGGAATGGGTGTCCTGATCAGGATAATCAAGATCACAGGCTTAGGCTTAGACCAAGAAATGGGACTGCTATTGTTTCTCCCAAACCCAGGAATTCAGATTGGGATGGAGGTGGTGATGAGATGAAGGATGCACCTGCTTCCACTTCTTTGGTTAAATCCAATCGTAGGAGTCGTAGCAGCAGCAGCAGCAGTAGTAGTAGCAGTAGCAGAAATGCAGATGATCTGTTAAGCAGTCCAATTAGGCTGAAGAAAACCAGATCTGAGCCACTTAAGGCTCAGAGTCGGAGTCCAGTGGTATTGAGAAAGGTGAAATCTGAAGTGAAACCAGTAGCAGTCAATGTTAACGAGGAGGAGGAGGAGGAGAATGAGGCGACCTGTGACACAAAAACAAATACTAGTAGCAGTAATTTAAACTGCTACTCTGTCTCTATTAATCATGCTCATGCACTGGGGAAGAATTCCAATTCGGATTCCTATGAGTCAAGTTGCAAGATGAACACCAAGTCCAAGAAGCAGCCGGAATTTGATCCTTTAGGTATTAATATGAATATGAGTTCCAATTCAGTAGTGCAAGAGTCAGCAGCAGCCACCTGTGACTGTGAAGGAGGAGTAGAAGCTTGTCACCAACCTGATCAAGACCACAAGGTTACTGCAACACCTCATCAGAATCAGGATGATGGAGATGAAAATAATACTAATATTAATGTTCCAGATCATGACGGAGTTGAAAAGGAGGGGCCTGTTAATAATAATGACGAAGAAATCGAGGTAGAGGTGGTGAGAGAGGGCGACAATTCAGGTTCAGGCAAATTGATTAATTCTGTCAAGGAGGAGAAAATCATACCGGAAACCAAAAAGGCTACTACTACTAGTAGTAGTAGTACTGCCAAAGTGTCACCTTCCCTGCTGCACAAGTCCCACCGTCAACCTCAGCTCATTAAAAAATCCACCACCAATGCGAGTGCTGATGCTCCGCCGTCTCCACCTAACCAATATAAAAGTAAGTTATCTGATGATTCTCACCCAGACCCTCAAGCTCATGCTCATGGTCGGCTTCAGAGTTTAGTGGATTTAGTTATGTGGCAAGATGTATCCAGATCGGCTTTCGTCTTCGGACTTGGCACCTTTCTCATCATCTCATCCTCCTATGCAAAAGACCTCAACATCAGCATCATTTCTGTGGCGGCTTATTTGGGTCTGGTCTACCTCGCGGCTGTATTTCTGTACAGGTCATTTCAATCCAGAGGGGTCGTAGATGAAAGAGTTTTTCAGTCTCCAGAAATTAATAGTATGCTTGGAGAAGATGAAGCTCTTTGGTTAGTCAAATTGATTCTACCCTACCTCAATGAATCGCTACTGAAATTAAGGGGACTTTTCTCAGGAGATCCTGCTGTCACAATGAAGTTGGCCTTGATGCTGTTCGTATTGGCAAGATGTGGTAGCTACATTACAATATGGAAAATGGTCAAGCTTGGCTTTTTTGGCGTTTTCGTGATTCCCCCACTCTATTCGTCCTACTCCGCTCAAATGACAGCATACGCCTTCATGCTGTTTGTGGCTTTTCGATACTATCAACAGTCTTTGGGCACAGATGACTGGGTTCAAGAACAAAATGCGCAGTATGGTCTACACCAAAAACATATAGGAAGACAAAAGCGCAAAATACCTAGTCCAGCATATCAAAGGAAAGAGAAGAAAAGTTTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_112173.p1 GENE.S_Transcript_112173~~S_Transcript_112173.p1 ORF type:complete len:617 (+),score=120.22,Reticulon|PF02453.13|7.8e-24 S_Transcript_112173:276-2126(+)
MEGDKGTGTTMVGRRRKMVGAGGSSVWESRRKGDQKVNKLVGGGISIKGNGCPDQDNQDHRLRLRPRNGTAIVSPKPRNSDWDGGGDEMKDAPASTSLVKSNRRSRSSSSSSSSSSSRNADDLLSSPIRLKKTRSEPLKAQSRSPVVLRKVKSEVKPVAVNVNEEEEEENEATCDTKTNTSSSNLNCYSVSINHAHALGKNSNSDSYESSCKMNTKSKKQPEFDPLGINMNMSSNSVVQESAAATCDCEGGVEACHQPDQDHKVTATPHQNQDDGDENNTNINVPDHDGVEKEGPVNNNDEEIEVEVVREGDNSGSGKLINSVKEEKIIPETKKATTTSSSSTAKVSPSLLHKSHRQPQLIKKSTTNASADAPPSPPNQYKSKLSDDSHPDPQAHAHGRLQSLVDLVMWQDVSRSAFVFGLGTFLIISSSYAKDLNISIISVAAYLGLVYLAAVFLYRSFQSRGVVDERVFQSPEINSMLGEDEALWLVKLILPYLNESLLKLRGLFSGDPAVTMKLALMLFVLARCGSYITIWKMVKLGFFGVFVIPPLYSSYSAQMTAYAFMLFVAFRYYQQSLGTDDWVQEQNAQYGLHQKHIGRQKRKIPSPAYQRKEKKSF*

Click here to download the sequence:
Link to NCBI Protein BLAST