Transcript Information: S_Transcript_112212.p1


Annotated TAIR IDAT5G39150.1
Annotated Gene NameRmlC-like cupins superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:15670008-15670789 | Reverse length=221
E-Value6E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.5884484888242
Replicate 29.8902160085411
Replicate 35.087651333407
Condition 2: 8 Hour
Replicate 113.787967877457
Replicate 212.343088904677
Replicate 324.807236436832
Condition 3: 24 Hour
Replicate 16.4028106782776
Replicate 212.504171904192
Replicate 37.8275310222774


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_112212.p1 GENE.S_Transcript_112212~~S_Transcript_112212.p1 ORF type:3prime_partial len:116 (-),score=12.94,Cupin_1|PF00190.18|41,Cupin_1|PF00190.18|1.4e-06 S_Transcript_112212:2-346(-)
ATGGCCAAGTGTAGAGGTTCTTGTTATGGGATGTTGGCCATAGTCTTAGCTATGGGGTTCATGGTTCACACATCCTATGCTTCTGATCCTAGTCCTCTTCAGGATTTCTGTATTGGTGTAAGTGATCCTCACAATGCTGTATTTGTTAACGGGATGTATTGCAAGAATCCAAAGGATGTTACATCAAATGATTTCTTGTACAAAGGCTACAATACAGTCGGAGACACAAACAACCCCTTAGGATCTAAGGTTGTGCAAGTAAATGTCACCACATTCCCTGCTCTTAACACACTAGGGGTGGCAATGGGCCGTGTAGACTTTGCACCCGGCGGGCTGAACTCTCCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_112212.p1 GENE.S_Transcript_112212~~S_Transcript_112212.p1 ORF type:3prime_partial len:116 (-),score=12.94,Cupin_1|PF00190.18|41,Cupin_1|PF00190.18|1.4e-06 S_Transcript_112212:2-346(-)
MAKCRGSCYGMLAIVLAMGFMVHTSYASDPSPLQDFCIGVSDPHNAVFVNGMYCKNPKDVTSNDFLYKGYNTVGDTNNPLGSKVVQVNVTTFPALNTLGVAMGRVDFAPGGLNSP

Click here to download the sequence:
Link to NCBI Protein BLAST