Transcript Information: S_Transcript_112215.p1


Annotated TAIR IDAT5G39150.1
Annotated Gene NameRmlC-like cupins superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:15670008-15670789 | Reverse length=221
E-Value2E-63
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.3807409440626
Replicate 26.4463294591916
Replicate 37.3619152267871
Condition 2: 8 Hour
Replicate 18.0738103258281
Replicate 24.6032610369808
Replicate 35.6140503980198
Condition 3: 24 Hour
Replicate 13.1463823957646
Replicate 25.4094694297455
Replicate 32.8024493783462


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_112215.p1 GENE.S_Transcript_112215~~S_Transcript_112215.p1 ORF type:complete len:243 (+),score=21.30,Cupin_1|PF00190.18|6.8e+02,Cupin_1|PF00190.18|6.4e-41,Cupin_2|PF07883.7|2.7e-08 S_Transcript_112215:133-861(+)
ATGGCTCTGAAAATGGGAAGTTGTATGGGAATGTTGGCCATGACAGCTTGTTGCATGGTTTTTGCAATAAGCTTGACATGTTACGTAGCCAACGCCTCGGATCCTAGTCCCCTTCAGGATTTCTGTATTGGAATAAATGATCCTCAATCTGCTGTGTTTGTCAATGGTTTTTTCTGCAAGAACCCAAAGGACGTCACGTCAAATGATTTCTTATACAAAGGCTTCGACACAGTCGGAGACACAAACAACAAGCTAGGATCCAAGGTTGTACAGGTAAACTCGACAACATTCCCAGCAATTAACACCTTGGGGGTGGCAATGGGTCGTGTAGACTTTGCACCAGGCGGTTTGAACCCTCCTCACTTACACCCTCGTTCATCCGAGATGCTCACCGTGATAGAAGGAACCCTATATGCCGGATTCATCAGCTCCAACCTACAATCTGGGGGTAACAAGCTATATGCTAAGATTATTAACAAGGGTGATATATTTGTGTTCCCTCAAGGACTCATTCACTTCCAACTTAATCTTGGTAGCACACCCGCCGTGGCTAATGTCGCCTTTGGTAGCCAAACACCGGGACTTGTTACTATTGCTAGTGCCGTGTTTGGCTCTATGCCCCTTATTTCTGATGATGTTCTTACTAAGGGATTTCAAGTTGATGAGAAGGCAATTAAGGCTCTTCGCTCCCAATTTTGGTCCGATGAACAACTATCAAGCTACATGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_112215.p1 GENE.S_Transcript_112215~~S_Transcript_112215.p1 ORF type:complete len:243 (+),score=21.30,Cupin_1|PF00190.18|6.8e+02,Cupin_1|PF00190.18|6.4e-41,Cupin_2|PF07883.7|2.7e-08 S_Transcript_112215:133-861(+)
MALKMGSCMGMLAMTACCMVFAISLTCYVANASDPSPLQDFCIGINDPQSAVFVNGFFCKNPKDVTSNDFLYKGFDTVGDTNNKLGSKVVQVNSTTFPAINTLGVAMGRVDFAPGGLNPPHLHPRSSEMLTVIEGTLYAGFISSNLQSGGNKLYAKIINKGDIFVFPQGLIHFQLNLGSTPAVANVAFGSQTPGLVTIASAVFGSMPLISDDVLTKGFQVDEKAIKALRSQFWSDEQLSSYM*

Click here to download the sequence:
Link to NCBI Protein BLAST