Transcript Information: S_Transcript_11230.p1


Annotated TAIR IDAT2G23780.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:10123551-10124234 | Reverse length=227
E-Value1.3E-43
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 130.72591960789
Replicate 230.486763752202
Replicate 335.544182270212
Condition 2: 8 Hour
Replicate 134.314491692114
Replicate 233.354392517411
Replicate 333.136454004107
Condition 3: 24 Hour
Replicate 135.150403434865
Replicate 231.93537085758
Replicate 333.017949039425


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_11230.p1 GENE.S_Transcript_11230~~S_Transcript_11230.p1 ORF type:3prime_partial len:110 (+),score=0.71,zf-C3HC4_3|PF13920.2|5.4e-10,zf-C3HC4|PF00097.21|6e-09,zf-C3HC4_2|PF13923.2|1.9e-08,zf-RING_5|PF14634.2|3.2e-08,zf-RING_2|PF13639.2|1.3e-07,zf-RING_UBOX|PF13445.2|1.1e-06,zf-RING_UBOX|PF13445.2|7.3e+02,zf-C3HC4_4|PF15227.2|9.9e-06 S_Transcript_11230:886-1212(+)
ATGAAAGAAAGAAAGAAAGGTCAGCCCGTGATTCGTTTCGTGAGAATGAAGAACGAGCACAGGAATCTAGGGTTTATTATAATGGCGAGTGGTTTTGAGGAATCAACGGCGAAGCCGAGTTCAAGTAACGGAGGAAATAACGATGCTGGTGATTTTGAGTGCAATATTTGTTTCGAATTACCCCAAGATCCAATTGTAACGCTATGTGGGCATCTATTTTGTTGGCCATGCCTATATAGGTGGCTTCATCACCACTCTCAATCCGAAGTATGTCCTGCTTGTAAAGCCCTTATTCAGGAAGACAAATTAGTACCCCTCTATGGTTTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_11230.p1 GENE.S_Transcript_11230~~S_Transcript_11230.p1 ORF type:3prime_partial len:110 (+),score=0.71,zf-C3HC4_3|PF13920.2|5.4e-10,zf-C3HC4|PF00097.21|6e-09,zf-C3HC4_2|PF13923.2|1.9e-08,zf-RING_5|PF14634.2|3.2e-08,zf-RING_2|PF13639.2|1.3e-07,zf-RING_UBOX|PF13445.2|1.1e-06,zf-RING_UBOX|PF13445.2|7.3e+02,zf-C3HC4_4|PF15227.2|9.9e-06 S_Transcript_11230:886-1212(+)
MKERKKGQPVIRFVRMKNEHRNLGFIIMASGFEESTAKPSSSNGGNNDAGDFECNICFELPQDPIVTLCGHLFCWPCLYRWLHHHSQSEVCPACKALIQEDKLVPLYGF

Click here to download the sequence:
Link to NCBI Protein BLAST