Transcript Information: S_Transcript_112435.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value9E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.85161603952578
Replicate 20.70600926584047
Replicate 30.73770944334402
Condition 2: 8 Hour
Replicate 10.34120624507413
Replicate 20.89487394558906
Replicate 30.85263390419925
Condition 3: 24 Hour
Replicate 10.87379533962377
Replicate 21.8131049261078
Replicate 30.40355271048186


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_112435.p1 GENE.S_Transcript_112435~~S_Transcript_112435.p1 ORF type:internal len:125 (+),score=21.93,zf-RVT|PF13966.2|1.9e-07,zf-RVT|PF13966.2|6.5e+03 S_Transcript_112435:3-374(+)
CACCTTGTAATAATGGCAAAGCAACGACGGAGGCCTTCTTGGTGCCTTTCTCCTGATATGTGCTTCATATGTGAAGCAAGTGGGGAAACTGTTTCTCATTTGTTTCTCCATTGTCCTGCCGTGAGGTCTTTATGGGCTTTGCCTTTTGGTATGCATGGGGAAGCTCTGTTGTGTCCTTCTAATGTGATGGAGTTCCTCCAGGTCCATTTTTGGGGGTTTGGTCGAGATAAGGAGCTGGGTATTTTATGGTGTAATGCGATTCTTGGTGTCCTGTGGTGTGTGTGGCTGGAGAGGAATGCTCGGGTGTTTAATCAAATTTCTCTTTCTCCTCCCCTCCTGTGGGAGCGTGTTACGTTCTTGGCCTCCCTTTGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_112435.p1 GENE.S_Transcript_112435~~S_Transcript_112435.p1 ORF type:internal len:125 (+),score=21.93,zf-RVT|PF13966.2|1.9e-07,zf-RVT|PF13966.2|6.5e+03 S_Transcript_112435:3-374(+)
HLVIMAKQRRRPSWCLSPDMCFICEASGETVSHLFLHCPAVRSLWALPFGMHGEALLCPSNVMEFLQVHFWGFGRDKELGILWCNAILGVLWCVWLERNARVFNQISLSPPLLWERVTFLASLW

Click here to download the sequence:
Link to NCBI Protein BLAST