Transcript Information: S_Transcript_112445.p1


Annotated TAIR IDAT5G39510.1
Annotated Gene NameVesicle transport v-SNARE family protein
Annotated Gene Symbol(s)VTI11, ATVTI1A, ATVTI11, ZIG, SGR4, VTI1A, ZIG1
Annotation TypeOrtholog
Chromosome Positionchr5:15822035-15823591 | Forward length=221
E-Value2.7E-112
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 119.387752031059
Replicate 228.951171817553
Replicate 326.87131682769
Condition 2: 8 Hour
Replicate 146.80006472312
Replicate 246.970759134992
Replicate 345.139441987019
Condition 3: 24 Hour
Replicate 134.200586822378
Replicate 229.021984959757
Replicate 334.694576919255


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_112445.p1 GENE.S_Transcript_112445~~S_Transcript_112445.p1 ORF type:complete len:221 (+),score=45.66,V-SNARE|PF05008.11|2.5e-25,V-SNARE|PF05008.11|5.4e+03,V-SNARE_C|PF12352.4|1.3e+02,V-SNARE_C|PF12352.4|7e+03,V-SNARE_C|PF12352.4|2.2e-21,Sec20|PF03908.9|8.8e+02,Sec20|PF03908.9|4.6e-06 S_Transcript_112445:205-867(+)
ATGAGTGAGGTGTTCGAAGGGTACGAGCGACAATACTGTGAGCTTTCAGCCAATCTTACAAGAAAGTGTACATCTGCCAGTCTTCTTGACGGCGAGCAAAAAAAGCAAAAGGTTTCTGAAATCAAAGCTGGAGTAGATGAAGCAGAATCTCTGATCAGAAAGATGGATCTTGAGGCAAGAAGTTTGCAGCCAAATGTCAAGGCTGTTCTTCTTGTCAAGTTGAGAGAATACAAATCAGATTTGAACAACTTAAAAAGTGAAGTGAAGAGAATCTCGTCTGGTAACCCAAACCAGGCTGCTCGGGATGAGTTGTTAGAATCAGGGATGGCTGATGCATTAACAGTATCAGCTGCACAAAGAGCGAGATTGATGATGTCAACAGAAAGACTGAATAAATCTGGTGACAGAATCAGGGAAGGCAGAAGGACAATGCTTGAAACTGAAGAGCTGGGGGTCTCAATTCTTCAAGATCTACACCAACAGCGACAGTCTCTTCTACATGCAAATAACACGCTTCATGGAGTAGATGAAAATGTCGGCAGAAGTAAAAGGATATTGACCAACATGTCGAGGAGGATGAGCAGGAACAAATGGATTATTGGTATTATAATTGCTGTCCTTGTTGTAGCTATCGTCTTGATCCTGTACTTCAAATTCAGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_112445.p1 GENE.S_Transcript_112445~~S_Transcript_112445.p1 ORF type:complete len:221 (+),score=45.66,V-SNARE|PF05008.11|2.5e-25,V-SNARE|PF05008.11|5.4e+03,V-SNARE_C|PF12352.4|1.3e+02,V-SNARE_C|PF12352.4|7e+03,V-SNARE_C|PF12352.4|2.2e-21,Sec20|PF03908.9|8.8e+02,Sec20|PF03908.9|4.6e-06 S_Transcript_112445:205-867(+)
MSEVFEGYERQYCELSANLTRKCTSASLLDGEQKKQKVSEIKAGVDEAESLIRKMDLEARSLQPNVKAVLLVKLREYKSDLNNLKSEVKRISSGNPNQAARDELLESGMADALTVSAAQRARLMMSTERLNKSGDRIREGRRTMLETEELGVSILQDLHQQRQSLLHANNTLHGVDENVGRSKRILTNMSRRMSRNKWIIGIIIAVLVVAIVLILYFKFR*

Click here to download the sequence:
Link to NCBI Protein BLAST