Transcript Information: S_Transcript_112605.p1


Annotated TAIR IDAT3G05670.1
Annotated Gene NameRING/U-box protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:1653888-1657022 | Forward length=883
E-Value2E-29
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.1413224269643
Replicate 23.2479703460002
Replicate 32.9841031859407
Condition 2: 8 Hour
Replicate 15.1192249965531
Replicate 23.5605064148106
Replicate 34.5515271411167
Condition 3: 24 Hour
Replicate 13.7953312165356
Replicate 23.1861591871258
Replicate 33.2447457656449


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_112605.p1 GENE.S_Transcript_112605~~S_Transcript_112605.p1 ORF type:complete len:754 (+),score=115.89,PHD|PF00628.25|1.6e+04,PHD|PF00628.25|5.3e-09,zf-RING_2|PF13639.2|9.4e-08,zf-RING_2|PF13639.2|1.6e+04,zf-RING_2|PF13639.2|6.5e+02 S_Transcript_112605:146-2407(+)
ATGGAAGAAACCCTAGACCCGGATTCTTCCCCAAATAAACGCCTGAAATCCGAAACCCTAACCCTAGAAACTCCAATTTCACCTTCATCAGCCAAAGGCAAAGCCCCAATTTGCGACGATGCCATCTTCGGCGTCGATGACAACGAATCTCCGGCTGATTTACCCCCTCAAAATTGTGGAATTTGCTTCTCGGAAGAAGGGAAATCGATTAGAGGTCTTGTCGATAGTTGCGACCATTACTTTTGCTTTCTTTGCATCATCGAATGGTCCAAGATTGAGTCTCGATGTCCCTTATGTAGGGCTCGGTTTAGCTCTATTCGTCGTGTGAGGAAAGATGGGAGCTTTATTGGGAATGGCTCTGTTAGGGTTCCTGTTCGTGATCAGATTTATGATCCTTTTGGGGATCCTGTTGATCCTTACGCACAAGCGAAGTGCAATGTTTGCAGTGGTACACATGAAGAGAACCTCCTCCTACTATGTGATCTTTGTGACTCGGCCTGGCATACTTTCTGTGTTGGCCTTGGCGCCACTGTACCTGATGGCGACTGGTATTGTAACGATTGTGCACTTCTACGAGCTGAACAGTGCGATGCTCAAATGGATGATAGTGCAGATAATTCAAGTCATTTGAAACTTGTAGATGATGTTGCACCATCAACATCACCATCACCATCACCATCACCGTTGTCAGTGCCACCACGCCGGCCATCAGTTTCAGTCTCGATATTTGATATTGTAAGGGATCCAAGTGAGAGGGAAGCTGAGCCCGAGTCCGGCACTGATAGGCTTCGGAATTTAGTATCTCCATCTAAGAAGAAATTGTCTTCCTCAGTTAATAGTGGATGCACTGGAAGCTTACAAGGTAAAAGTGGCAAATCTCAAATTTACGCAACAGAATATAGTGCAAGAACGTTGCACAAGTGCCGAAATATTCATAGGCATATAAGTGTCTTACGTGAGAATTGGGATGCCTTCAGGACTGGATCCTTAAGCTTCTCCTCGAAGCCGTTGGATTCTAGTAGGGAAGGTAGTCGAAAGGGGAATGTGGTTGCAATGTGTGCAGAAAGATTTGGAAAATCACAATCAGTGTCATCCACAAGCTCATTGCAATTGAAGGCACAAGAGGCTTCATGCAATGCTGGTTCAAATAAACTGCCTTATAATCTTAACAGAGCTTGGAAATTGATGGATAAGTCAATGCATCAGTTTGTTAAACCAAAAGATGCCCCTAAGACTACATGCAATAAAGGGCATGGCGTAAAGGCTGGTAATATTTCATCCAAGTGTGTCCTGCTTAGAAGAAAGGATCTGGTGTCTGCTTCATCAAGAGCACAAAATCGTAATGCGATAAATGAGTGGCTTCCTCAGAGGTCCGGACAACAGTTGACTAGCATTGTCACTGAAGCTGCTGGCACCTCTGGCAGCAAATGTCACAAATCTTTTGTGTCTAGATTACATTCATTCGGAAAGGTTCAAACTCCAATACAAGCTGATATTTGTCATCTCAAAGCAAACTTCCCATCACGAGGAAAGCTGCACAAAGGCAAACCCACCTTTCCCAATAATGGGGCTGCCTGTTCATCCTTATCCTCCGGGCCAGTAGCTGGATCTTTCAATTTATCTTGCACTAAATCCCAAATTAAGGAAATATCTCCGTGTCACGTGAAACAAGTTGGGAATGCAAATAATTGTATTGCTAGCCAGGTTGATGTACAGACCTCAGCACGAGCTGAAATTTGTAATGATAGGGCTGTTTTACATTCTCAACAGAACCAGGGTGAAGGATTATCAAATGTCTCTGGTGAACACAAGGTTTCAGCCTGCTCAACATCTCGATACGATCCTGTAATAGGTGCATCCAGTGCATTGTGTGTCAATTTACAAGGAGAAAAGACGTCTGGGTGTCCCAGTGAAGTTGGGGCTAACACTGCTACCAAATCAAGTATAAATGACGAAGCAAAGGATGAGATCATATCCCTTGTGAAGCTAAACCTTAAGCTTCTAAGTAAAGGCAAACGATTAGAAGCCGATACATTCAAGGAAATCGCCAAACTTTCTACTCATACAATTTTGGCTGCCTGTGGTTTTAAGCATCGGAAAATTGTTCATTCTTACCCTACTGTAGTATGTGATCACGGTGATCAGGTCCGCAGGTCTACCCTCATGCCTAGTTTGTGTAGAGAATGTTTCTGTCAGTTTGTCAAGAATGTTGTTACCTCGATCATGCTTGAGAAATTGAATAATGCTGGAGTTGCATGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_112605.p1 GENE.S_Transcript_112605~~S_Transcript_112605.p1 ORF type:complete len:754 (+),score=115.89,PHD|PF00628.25|1.6e+04,PHD|PF00628.25|5.3e-09,zf-RING_2|PF13639.2|9.4e-08,zf-RING_2|PF13639.2|1.6e+04,zf-RING_2|PF13639.2|6.5e+02 S_Transcript_112605:146-2407(+)
MEETLDPDSSPNKRLKSETLTLETPISPSSAKGKAPICDDAIFGVDDNESPADLPPQNCGICFSEEGKSIRGLVDSCDHYFCFLCIIEWSKIESRCPLCRARFSSIRRVRKDGSFIGNGSVRVPVRDQIYDPFGDPVDPYAQAKCNVCSGTHEENLLLLCDLCDSAWHTFCVGLGATVPDGDWYCNDCALLRAEQCDAQMDDSADNSSHLKLVDDVAPSTSPSPSPSPLSVPPRRPSVSVSIFDIVRDPSEREAEPESGTDRLRNLVSPSKKKLSSSVNSGCTGSLQGKSGKSQIYATEYSARTLHKCRNIHRHISVLRENWDAFRTGSLSFSSKPLDSSREGSRKGNVVAMCAERFGKSQSVSSTSSLQLKAQEASCNAGSNKLPYNLNRAWKLMDKSMHQFVKPKDAPKTTCNKGHGVKAGNISSKCVLLRRKDLVSASSRAQNRNAINEWLPQRSGQQLTSIVTEAAGTSGSKCHKSFVSRLHSFGKVQTPIQADICHLKANFPSRGKLHKGKPTFPNNGAACSSLSSGPVAGSFNLSCTKSQIKEISPCHVKQVGNANNCIASQVDVQTSARAEICNDRAVLHSQQNQGEGLSNVSGEHKVSACSTSRYDPVIGASSALCVNLQGEKTSGCPSEVGANTATKSSINDEAKDEIISLVKLNLKLLSKGKRLEADTFKEIAKLSTHTILAACGFKHRKIVHSYPTVVCDHGDQVRRSTLMPSLCRECFCQFVKNVVTSIMLEKLNNAGVAC*

Click here to download the sequence:
Link to NCBI Protein BLAST