Transcript Information: S_Transcript_112620.p2


Annotated TAIR IDAT4G15510.1
Annotated Gene NamePhotosystem II reaction center PsbP family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:8860701-8862529 | Forward length=287
E-Value3.6E-65
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 119.528964935168
Replicate 219.205737672369
Replicate 322.157819611232
Condition 2: 8 Hour
Replicate 113.807806680158
Replicate 216.255803687859
Replicate 316.868656378043
Condition 3: 24 Hour
Replicate 112.729752249915
Replicate 219.565880497566
Replicate 323.226055279531


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_112620.p2 GENE.S_Transcript_112620~~S_Transcript_112620.p2 ORF type:complete len:139 (+),score=25.11,PsbP|PF01789.12|9.3e-35 S_Transcript_112620:637-1053(+)
ATGGTAGCACTCCTCTCTGGTTGCATTGCCACCCAGATCATTGCTCATGGTTCGGCGGTTGCTCAACCATTGGTTGTTCTTAGGGAGTACATAGACTTTTTCGACGGGTACTCTTTGAGATACCCTCAGAACTGGATTCAAGTTAAAGGTGCTGGGGCAGACATATTCTTCAGGGATCCTTTCGTTCTCGATGAAAATCTTTCAGTTGATATCTCTTCGCCCTCTTCATCTAACTACAAGAGCGTCGAGGATCTAGGCCCACCAGAAGCAGCCGGAAAGAAAGTACTTAAGCAGTATCTTACTGAGTTCATGTCTACCAGACTTGGTGTTCGGCGTGAATCAGACATTCTCTCCACATCTTCTAGAGTTGCTGATGATGGAAAGCTCTATTATCAAGTTGAAGTAAGGACTTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_112620.p2 GENE.S_Transcript_112620~~S_Transcript_112620.p2 ORF type:complete len:139 (+),score=25.11,PsbP|PF01789.12|9.3e-35 S_Transcript_112620:637-1053(+)
MVALLSGCIATQIIAHGSAVAQPLVVLREYIDFFDGYSLRYPQNWIQVKGAGADIFFRDPFVLDENLSVDISSPSSSNYKSVEDLGPPEAAGKKVLKQYLTEFMSTRLGVRRESDILSTSSRVADDGKLYYQVEVRTS*

Click here to download the sequence:
Link to NCBI Protein BLAST