Transcript Information: S_Transcript_112624.p1


Annotated TAIR IDAT4G15510.1
Annotated Gene NamePhotosystem II reaction center PsbP family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:8860701-8862529 | Forward length=287
E-Value3.5E-109
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 148.687351096919
Replicate 247.631681331534
Replicate 352.611836269496
Condition 2: 8 Hour
Replicate 128.020570998093
Replicate 233.817910734471
Replicate 334.782836595725
Condition 3: 24 Hour
Replicate 131.666614052257
Replicate 242.692296225213
Replicate 339.788263848381


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_112624.p1 GENE.S_Transcript_112624~~S_Transcript_112624.p1 ORF type:5prime_partial len:258 (+),score=50.42,PsbP|PF01789.12|3.7e-52 S_Transcript_112624:2-775(+)
CTTCCATTTCTCCCTTCTTCTTCTTTTTTGCCTTCTACAATCAGCCGTCAAACGGCATCGTTTCTGTTACCCAATTTGTCAAGGTCTTCTCTTAGAGTAATTTCCCAAGCTCAACCAACTACAGCTTTTGCAGTCTCAAAAAGGAATGCAATGGTAGCACTCCTCTCTGGTTGCATTGCCACCCAGATCATTGCTCATGGTTCGGCGGTTGCTCAACCATTGGTTGGTTTTAGGGAGTACATAGACTTTTTCGACGGGTACTCTTTGAGATACCCTCAGAACTGGATTCAAGTTAAAGGTGCTGGGGCAGACATATTCTTCAGGGATCCTTTCGTTCTCGATGAAAATCTTTCAGTTGATATCTCTTCGCCCTCTTCATCTAAGTACAAGAGTGTCGAAGATCTAGGCCCACCAGAAGAAGCCGGAAAGAAAGTACTTGAGCAGTATCTTACTGAGTTCATGTCTACCAGACTTGGTGTTCGGCGTGAATCAGACATTCTCTCCACATCTTCTAGAGTTGCTGATGATGGAAAGCTCTATTATCAAGTTGAAGTAAACATAAAGTCATATGCCAACAACAACGAGTTAGCGGTCATGCCTCAAGACCGAGTTGTTCAGCTGGAGTGGGACCGAAGGTACCTCTCAGTTCTTGGGGTAGAAAACAATAGGCTGTATGAACTGCGGTTACAAGCACCTGAAAATGTGTTCCTTGAAGAGGAAAATGACCTTAGGCAAGTGATGGATTCCTTCAGAGTGAACAAGGTTGGGGCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_112624.p1 GENE.S_Transcript_112624~~S_Transcript_112624.p1 ORF type:5prime_partial len:258 (+),score=50.42,PsbP|PF01789.12|3.7e-52 S_Transcript_112624:2-775(+)
LPFLPSSSFLPSTISRQTASFLLPNLSRSSLRVISQAQPTTAFAVSKRNAMVALLSGCIATQIIAHGSAVAQPLVGFREYIDFFDGYSLRYPQNWIQVKGAGADIFFRDPFVLDENLSVDISSPSSSKYKSVEDLGPPEEAGKKVLEQYLTEFMSTRLGVRRESDILSTSSRVADDGKLYYQVEVNIKSYANNNELAVMPQDRVVQLEWDRRYLSVLGVENNRLYELRLQAPENVFLEEENDLRQVMDSFRVNKVGA*

Click here to download the sequence:
Link to NCBI Protein BLAST