Transcript Information: S_Transcript_112713.p1


Annotated TAIR IDAT5G42660.1
Annotated Gene NameProtein of unknown function (DUF616)
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:17103062-17105785 | Reverse length=463
E-Value3.5E-221
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.3200065973338
Replicate 26.9888339592128
Replicate 38.782255277905
Condition 2: 8 Hour
Replicate 110.905530866111
Replicate 29.8658462945378
Replicate 39.5325529662028
Condition 3: 24 Hour
Replicate 17.4173103363508
Replicate 27.2730658267781
Replicate 37.7284939377996


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_112713.p1 GENE.S_Transcript_112713~~S_Transcript_112713.p1 ORF type:complete len:483 (+),score=74.28,DUF616|PF04765.9|8e-119 S_Transcript_112713:147-1595(+)
ATGTACAACACTAACACCACCACCAACAACATCTCAATACCGCTTTCGGACGAAGATGCGGATGAATTCGCTGGCAGAATAAGAGTCAGAACTCGTAGAAAGCGCAAGAAATCATCAGCAGCTGCTTTCCGATCCAATAATGCCGAGTTAACTCGCCGTCTAGTGCGAAAACTCGCTAAGTGGTGGCCGCTCTTGCTTTTCCTTCCTGCTCTTGCTTTGGTTCTCTTTGAAGCTTCTCAACTCGCTGGTGGTTCTGGTAACAAGGCCCCACCCAGTCATGAATCGTTCACCCGGTCGAGGCCCGGTTTTTTTGTGGAGAAGAAGAAATCTGATGATAACATGAACCGTTTGGATCCTACTTATCACACTGTCGCCGGTGTCAAACAACGTTGCTTGAAGCTCTTATCTACAGAAGAACTTGAGAATTTGGATGTACCTATGCTAAAAGAGTCAACTGGCCCTGTTAAGAATGTGGTGTATATATCAGAATACAATAACCCTAATTTAGTGGATAATTCTACACTCTTGCGACAGCACAGTGAAGCTGGAAGATTTAACTTATTTACAGGATACCAGACACTTGATCAGAGGGATAAAAGCTTCAAGGTGACCGAAAGGCCTATGGTGCATTGTGGTTTCTACAGTGAAAATGGTGGATTTAAGATTTCAGATGAGGATAAAAAATTTATGCAAACTTGCAAGGTCGTGGTGTCTACATGTGCATTTGGTGGTGGAGACGATCTTTATCAGCCTATTGGAATGTCAACGGCATCACTTCAAAAGGTCTGCTATGTGGCATTTTGGGATGAAATCACCCTTAGTATGCAGGAAACTCAGGGACACAAAATTGATAATAATCATCATATTGGAAAATGGCGGATTGTTATTGTGAAGACACTCCCTTTCTCAGACCAGCGACTTAATGGTAAAGTTCCTAAGATGTTAGCCCATCGCCTGTTTCCTAATGCGCGGTATTCTATCTGGGTTGATTCAAAGTCTCAGTTTAGGAGGGATCCCTTGGGTGTACTAGAAGCTTTGCTTTGGCGCTCAAATTCTGTGCTTGCAATTTCACAGCATGGTGCCCGTAGTAGTGTCTACGATGAAGCTAAAGCTGTTGTTAAGAAAAACAAAGCCACACCAGAGGAGGTCGAGGTTCAAATAACTCAATATCGGCTTGATGGCCTTCCAGAGGACAAGAGATTTAATGGAAAGAAAGCTTTGAATGAAGCGTCCATCATTGTTAGGGAGCACACATCCTTGACTAATCTGTTCATGTGCCTTTGGTTTAATGAAGTGGTTCGCTTTACGTCTCGCGATCAACTGAGCTTTCCCTATGTTCTCTGGCGGTTGAAATTGTTAACCGGTGTCAATATGTTTCCTGTTTGTACACGCAAAGACCTCGTAAATAGTATGGGTCACATACGTAAGGCTAAGCCACTTGAGATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_112713.p1 GENE.S_Transcript_112713~~S_Transcript_112713.p1 ORF type:complete len:483 (+),score=74.28,DUF616|PF04765.9|8e-119 S_Transcript_112713:147-1595(+)
MYNTNTTTNNISIPLSDEDADEFAGRIRVRTRRKRKKSSAAAFRSNNAELTRRLVRKLAKWWPLLLFLPALALVLFEASQLAGGSGNKAPPSHESFTRSRPGFFVEKKKSDDNMNRLDPTYHTVAGVKQRCLKLLSTEELENLDVPMLKESTGPVKNVVYISEYNNPNLVDNSTLLRQHSEAGRFNLFTGYQTLDQRDKSFKVTERPMVHCGFYSENGGFKISDEDKKFMQTCKVVVSTCAFGGGDDLYQPIGMSTASLQKVCYVAFWDEITLSMQETQGHKIDNNHHIGKWRIVIVKTLPFSDQRLNGKVPKMLAHRLFPNARYSIWVDSKSQFRRDPLGVLEALLWRSNSVLAISQHGARSSVYDEAKAVVKKNKATPEEVEVQITQYRLDGLPEDKRFNGKKALNEASIIVREHTSLTNLFMCLWFNEVVRFTSRDQLSFPYVLWRLKLLTGVNMFPVCTRKDLVNSMGHIRKAKPLEI*

Click here to download the sequence:
Link to NCBI Protein BLAST