Transcript Information: S_Transcript_112908.p1


Annotated TAIR IDAT3G48990.1
Annotated Gene NameAMP-dependent synthetase and ligase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:18159031-18161294 | Reverse length=514
E-Value2E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.407527030894
Replicate 219.275910876566
Replicate 313.006982290539
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.44875468642066
Condition 3: 24 Hour
Replicate 117.935799076488
Replicate 215.983951322266
Replicate 315.398721847334


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_112908.p1 GENE.S_Transcript_112908~~S_Transcript_112908.p1 ORF type:complete len:95 (+),score=-2.46,AMP-binding|PF00501.24|3.2e-06 S_Transcript_112908:110-394(+)
ATGGAGAGCCTGACTCTCACCGGACTGTTGAAAGACGTCGCCGGAAAGTTCCCCGACCGGCGAGCAATATCGGTTTCCGGGAAGTTTGACCTTAGCCATTCTCGTTTACTCCATTTGGTCGAACTTGCCGCTTCTCGTCTTGCTGCTTCCGGTGTTTGTCCTGGCGATGTTGTTGCCCTCACCTTTCCTAACAACATCGAGGTATATTTTTTTTTTTGTTTTTTTTTTTTGTTGCGTTTCCTAAGAACATCCGCCCCGATAATTACTGCTGTAATTCTTGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_112908.p1 GENE.S_Transcript_112908~~S_Transcript_112908.p1 ORF type:complete len:95 (+),score=-2.46,AMP-binding|PF00501.24|3.2e-06 S_Transcript_112908:110-394(+)
MESLTLTGLLKDVAGKFPDRRAISVSGKFDLSHSRLLHLVELAASRLAASGVCPGDVVALTFPNNIEVYFFFCFFFLLRFLRTSAPIITAVILD*

Click here to download the sequence:
Link to NCBI Protein BLAST