Transcript Information: S_Transcript_112909.p1


Annotated TAIR IDAT3G48990.1
Annotated Gene NameAMP-dependent synthetase and ligase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:18159031-18161294 | Reverse length=514
E-Value2.1E-37
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1589.51152315912
Replicate 2681.72165716792
Replicate 3703.76860971118
Condition 2: 8 Hour
Replicate 125.805514333337
Replicate 223.875838464246
Replicate 326.152216389305
Condition 3: 24 Hour
Replicate 1698.48556035051
Replicate 2678.39072970546
Replicate 3627.79576073911


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_112909.p1 GENE.S_Transcript_112909~~S_Transcript_112909.p1 ORF type:internal len:119 (+),score=3.89,AMP-binding|PF00501.24|1.9e-13 S_Transcript_112909:3-356(+)
CGCTCTTCCGATCTCACATTTCAACCAACATTTTCCCCAACCGAAAAAAAACTAAAACTCAAAAAATTCGTCACCAAGATTTCAGGCTACAACATGGAGAGCCTGACTCTCACCGGACTGTTGAAAGACGTCGCCGGAAAGTTCCCCGACCGGCGAGCAATATCGGTTTCCGGGAAGTTTGACCTTAGCCATTCTCGTTTACTCCATTTGGTCGAACTTGCCGCTTCTCGTCTTGCTGCTTCCGGTGTTTGTCCTGGCGATGTTGTTGCCCTCACCTTCCCTAACAACATCGAGTTTGTGATAGCGTTCTTGGCGGTGATACGAGCAAGAGCAACAGCGGCTCCACTGAACCCG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_112909.p1 GENE.S_Transcript_112909~~S_Transcript_112909.p1 ORF type:internal len:119 (+),score=3.89,AMP-binding|PF00501.24|1.9e-13 S_Transcript_112909:3-356(+)
RSSDLTFQPTFSPTEKKLKLKKFVTKISGYNMESLTLTGLLKDVAGKFPDRRAISVSGKFDLSHSRLLHLVELAASRLAASGVCPGDVVALTFPNNIEFVIAFLAVIRARATAAPLNP

Click here to download the sequence:
Link to NCBI Protein BLAST