Transcript Information: S_Transcript_112990.p1


Annotated TAIR IDAT5G08170.1
Annotated Gene Nameporphyromonas-type peptidyl-arginine deiminase family protein
Annotated Gene Symbol(s)EMB1873, ATAIH
Annotation TypeOrtholog
Chromosome Positionchr5:2628663-2631047 | Reverse length=383
E-Value4.9E-220
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 125.914497265753
Replicate 224.900261180397
Replicate 323.331755360356
Condition 2: 8 Hour
Replicate 118.358866204776
Replicate 216.030222253662
Replicate 317.399550144749
Condition 3: 24 Hour
Replicate 121.386198272944
Replicate 228.076952923979
Replicate 325.288243996731


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_112990.p1 GENE.S_Transcript_112990~~S_Transcript_112990.p1 ORF type:complete len:381 (+),score=80.80,PAD_porph|PF04371.11|2.4e-130 S_Transcript_112990:291-1433(+)
ATGGAGTTACACGGAACACCAGCAAAACATGGGTATCGAATGCCTGCAGAATGGGAACCCCATGCCCAGTGTTGGATGGGTTGGCCTGAACGGCCAGATAATTGGAGAAATCATGCAATTCATGCTCAACATGTTTTTGCCAGAGTAGCAACTGCAATTTCAAAATTTGAGCCGGTGACCATCTGTGCTAGTTCTGCTCAGTGGTCCAATGCACGCAAGCAATTGCCCCATCATATTAGGGTAGTGGAGATGAGTATGAATGATTCCTGGTTCCGCGATACTGGACCAACTTTTGTTATACGCAACAGAAAATCAGCTCCAGGCGCTCTCCCAAACAGTCTTGTAGGAGTTGACTGGAATTTCAACAGCTGGGGTGGTGTTGATGATGGCTGTTATAAAGACTGGACTCTTGACATGCTTGTTGCTCGGAAGATTTTAGGGACTGAAAAGCTTCCAAGGTTTGCACATTTCATGATTCTAGAAGGAGGCAGCATCCATGTTGATGGAGAAGGAACATGCCTCACGACCGAGGAATGCCTCTTAAATAAAAACAGAAACCCACATATGACCAAAGAACAGATCGAAGATAATCTGAAGGAATACCTTGGAGTCCAAAAGGTTATCTGGCTGCCACGAGGACTATATGGTGATGATGATACCAATGGCCACATAGATAATATGTGCTGCTTTGTGAAGCCCGGAGTAGTGTTGTTGTCCTGGATTGATGATGAATCAGATCCACAGTATGAACGATCTATTGAAGCCTTCTCAGTTCTTTCCAATTCCACAGATGCCCATGGTAGAAAGTTAAAAGTTATTAAACTTCATGTACCTGGTCCATTGTATATGACCGAGGAGGAAGCAGCTGGTGTCATCAAGGATGGGGAGGCAAAACCAAGGGAACCTGGAACAAGACTTGCTGCCTCTTATGTCAACTTCTACATTGCCAATGGAGGGATTATAGCTCCTCAATTTGGAGATGAAAAGTGGGACAACGAAGCTTTTCGTGTTTTATCTGAAGCCTTTCCTGGTTATGAGGTTGTGGGAATCGAAGGTGCCAGAGAAATTGTATTGGGAGGCGGAAATATTCACTGCATCACCCAGCAGCAGCCAGCTGTGGAAGTGAGGTCGACACAAGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_112990.p1 GENE.S_Transcript_112990~~S_Transcript_112990.p1 ORF type:complete len:381 (+),score=80.80,PAD_porph|PF04371.11|2.4e-130 S_Transcript_112990:291-1433(+)
MELHGTPAKHGYRMPAEWEPHAQCWMGWPERPDNWRNHAIHAQHVFARVATAISKFEPVTICASSAQWSNARKQLPHHIRVVEMSMNDSWFRDTGPTFVIRNRKSAPGALPNSLVGVDWNFNSWGGVDDGCYKDWTLDMLVARKILGTEKLPRFAHFMILEGGSIHVDGEGTCLTTEECLLNKNRNPHMTKEQIEDNLKEYLGVQKVIWLPRGLYGDDDTNGHIDNMCCFVKPGVVLLSWIDDESDPQYERSIEAFSVLSNSTDAHGRKLKVIKLHVPGPLYMTEEEAAGVIKDGEAKPREPGTRLAASYVNFYIANGGIIAPQFGDEKWDNEAFRVLSEAFPGYEVVGIEGAREIVLGGGNIHCITQQQPAVEVRSTQE*

Click here to download the sequence:
Link to NCBI Protein BLAST