Transcript Information: S_Transcript_113056.p1


Annotated TAIR IDAT5G11010.2
Annotated Gene NamePre-mRNA cleavage complex II protein family
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:3484176-3486067 | Forward length=368
E-Value9.9E-152
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.0048691179155
Replicate 23.6949817462828
Replicate 33.5363498801079
Condition 2: 8 Hour
Replicate 15.9524754525978
Replicate 27.7106856962164
Replicate 37.0880367035982
Condition 3: 24 Hour
Replicate 14.5068327589818
Replicate 24.5657678661088
Replicate 33.1221462734488


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_113056.p1 GENE.S_Transcript_113056~~S_Transcript_113056.p1 ORF type:complete len:412 (+),score=67.42,CLP1_P|PF16575.1|4.2e-42 S_Transcript_113056:99-1238(+)
ATGGAAGCTGTAGAAGCTGTAGGAGAAACCCAATCACCCAACATACTCATACCAGAAGAATGGTCTGTTGCTGCTGAATCCATTGCCTATGATTCCTCCACTTCTATTCCTCCTATTGCTTTGATTTGTGGAGCTAAGAACAGTGGCAAAACCACCTTCTCTCGTTACCTCCTCAACATTCTCCTTCTCAGGTACAAAAGAGTGGCTTATTTGGATACAGATGTGGGACAGCCAGAGTTCACTCCCCCTGGTTGTTTATCCCTTACTGTAATTGAGAAGGCAACTCCAGACCTGACTATCCCTATCCTGAAAACACCTGAAAGATGCTACTTCTTTGGTGACATTTCTTCAAAAAGGGATCCTGAAACATACTTGAAGTGTATAATTGCATTATTTGAATACTACAAACAGAAGACATGCTTGCCGCGTAAGAACCGAAGTCCAGGCAGGGCTGAGCTACCTCTCATCATTAACACACCTGGCTGGGTCAAAGGTATGGGTTATGATACATTGGTTGTTATGTTGAAAACAATTGGTCCAACTCACGTTATCAAGATAAACATATCTTCTGAGAGTAAAAATCTGCCTTCTGGAGCGTTCTGGTTGGACAATGACGATGGTGCTTCGGTCAACTTGATTGAGATCAGCTCTGCACTCAAGGATTCTAACAACAGATCGGTGTTGGTGCAAAAGGAAGCACGTCTTAATCGAGAGTTAAGGCTGAGGGGTTACTTTAGGCAATGCTTCCCAAGTGATATGAATATCGTGACAATTAAGGAACTTGGACTTGCATTAGCATCACATCCTCCTTATCAAGTCCCTATACAAAGGATCAAAATTAGTCATCTTCATTGCCAGGTCCCCAGCACTGAACTACTCTATAGTTTGAATGGGACCATAGTTGGCTTGGCCGTTAGCTCTGAGGACAGTCAATCTCTGCCTGTCTGTGTTGGCCTTGGCATTGTTAGAGGCATCGATATGTTGAAGAATTTGCTGTACGTGATCACACCTGTTCCACAAATTATCCTAGCCAGGGTAGATCTTCTCCTACAAGGATTTATCCAGATTCCTACTGATTTGCTGCAGGTTCATGGATGCATATCACCTTACATGTCTGCTAATGTGATCCCTTCAAATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_113056.p1 GENE.S_Transcript_113056~~S_Transcript_113056.p1 ORF type:complete len:412 (+),score=67.42,CLP1_P|PF16575.1|4.2e-42 S_Transcript_113056:99-1238(+)
MEAVEAVGETQSPNILIPEEWSVAAESIAYDSSTSIPPIALICGAKNSGKTTFSRYLLNILLLRYKRVAYLDTDVGQPEFTPPGCLSLTVIEKATPDLTIPILKTPERCYFFGDISSKRDPETYLKCIIALFEYYKQKTCLPRKNRSPGRAELPLIINTPGWVKGMGYDTLVVMLKTIGPTHVIKINISSESKNLPSGAFWLDNDDGASVNLIEISSALKDSNNRSVLVQKEARLNRELRLRGYFRQCFPSDMNIVTIKELGLALASHPPYQVPIQRIKISHLHCQVPSTELLYSLNGTIVGLAVSSEDSQSLPVCVGLGIVRGIDMLKNLLYVITPVPQIILARVDLLLQGFIQIPTDLLQVHGCISPYMSANVIPSN*

Click here to download the sequence:
Link to NCBI Protein BLAST