Transcript Information: S_Transcript_113058.p2


Annotated TAIR IDAT5G11010.2
Annotated Gene NamePre-mRNA cleavage complex II protein family
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:3484176-3486067 | Forward length=368
E-Value4E-29
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4582466430236
Replicate 20.30222999393856
Replicate 30.12632011016165
Condition 2: 8 Hour
Replicate 11.1685145379251
Replicate 20.15323183999813
Replicate 30.87599373719101
Condition 3: 24 Hour
Replicate 10.74811244830802
Replicate 20.15523158613937
Replicate 31.3820298304173


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_113058.p2 GENE.S_Transcript_113058~~S_Transcript_113058.p2 ORF type:5prime_partial len:146 (+),score=30.13,CLP1_P|PF16575.1|2.8e-20 S_Transcript_113058:3-440(+)
GAAAAACACACCGGGGCGGCAAATATACTCCTTTTCTCTCACCACCAAACTCGCAGGACAAACACGAAACTCACGACAAAGACAGAGAACAGAGAGATGGAAGCTGTAGAAGCTGTAGGAGAAACCCAATCACCCAACATACTCATACCAGAAGAATGGTCTGTTGCTGCTGAATCCATTGCCTATGATTCCTCCACTTCTATTCCTCCTATTGCTTTGATTTGTGGAGCTAAGAACAGTGGCAAAACCACCTTCTCTCGTTACCTCCTCAACATTCTCCTTCTCAGGTACAAAAGAGTGGCTTATTTGGATACAGATGTGGGACAGCCAGAGTTCACTCCCCCTGGTTGTTTATCCCTTACTGTAATTGAGAAGGCAACTCCAGATGCTACTTCTTTGGTGACATTTCTTCAAAAAGGGATCCTGAAACATACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_113058.p2 GENE.S_Transcript_113058~~S_Transcript_113058.p2 ORF type:5prime_partial len:146 (+),score=30.13,CLP1_P|PF16575.1|2.8e-20 S_Transcript_113058:3-440(+)
EKHTGAANILLFSHHQTRRTNTKLTTKTENREMEAVEAVGETQSPNILIPEEWSVAAESIAYDSSTSIPPIALICGAKNSGKTTFSRYLLNILLLRYKRVAYLDTDVGQPEFTPPGCLSLTVIEKATPDATSLVTFLQKGILKHT*

Click here to download the sequence:
Link to NCBI Protein BLAST