Transcript Information: S_Transcript_113108.p2


Annotated TAIR IDAT3G29230.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:11188803-11190605 | Forward length=600
E-Value2E-65
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1141169205517
Replicate 22.5774286866256
Replicate 32.2407062531477
Condition 2: 8 Hour
Replicate 12.7902379854193
Replicate 23.6589472074319
Replicate 33.9842705803703
Condition 3: 24 Hour
Replicate 11.429104527422
Replicate 22.1181132314343
Replicate 32.0036203499391


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_113108.p2 GENE.S_Transcript_113108~~S_Transcript_113108.p2 ORF type:complete len:214 (+),score=21.05,PPR_2|PF13041.2|8.2e+02,PPR_2|PF13041.2|2.5e-11,PPR_2|PF13041.2|7.4e-05,PPR|PF01535.16|45,PPR|PF01535.16|0.0004,PPR|PF01535.16|5.2,PPR|PF01535.16|0.32,PPR_3|PF13812.2|98,PPR_3|PF13812.2|0.0062,PPR_3|PF13812.2|4.4e+03,PPR_3|PF13812.2|4.8,PPR_3|PF13812.2|4.5e+02 S_Transcript_113108:518-1159(+)
ATGTCCGAACTCCAACCATACAAGAGCAGCAGACCACCAATGACCACAACCCCCATTCGAGCCCCAACATGGGTCTCCACAAGAAGGCAATTGGAACAAAAGCTATCTGAGCTACACAAATGTACAAACTTAGCTCACATAAAGCAAGTTCAAGCTCAAATCTTCAAGGCCAATCTTCATCAAGACCCCTTTGTGGCCCCCAAACTTATCTCAGCTTTCTCTCTTTGCCGTCACATGGCCTTAGCCATCAATTTGTTTAAACAAATTGAATACCCTAATGTTCATTTGTATAATACTTTAATTAGAGCTCATACCCAGAACTCACAGCCTTCCCAAGCATTGATTACCTTCCTTGATATGCAAAAAAATGGAGTCTTTGCTGATAATTTTACGTACCCATTTCTTCTAAGGGCCTGTAGTAGTGGACCCTATGCTTTCCAAATGGTTCAAATGTTTCATACCCATATAGAGAAATTTGGTTTTTCTGCTGATATTTTTGTGCCCAACTCTTTGATTGATAGTTATTCTAAGTGTGGGGCAATTGGTCTTAGTTCAGCTAGGAAACTGTTCATGTATATGGAGGATAGGGATATTGTTTCTTGGAATTCTATGATTAGTGGCTTGGTTAAAGGGGCAATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_113108.p2 GENE.S_Transcript_113108~~S_Transcript_113108.p2 ORF type:complete len:214 (+),score=21.05,PPR_2|PF13041.2|8.2e+02,PPR_2|PF13041.2|2.5e-11,PPR_2|PF13041.2|7.4e-05,PPR|PF01535.16|45,PPR|PF01535.16|0.0004,PPR|PF01535.16|5.2,PPR|PF01535.16|0.32,PPR_3|PF13812.2|98,PPR_3|PF13812.2|0.0062,PPR_3|PF13812.2|4.4e+03,PPR_3|PF13812.2|4.8,PPR_3|PF13812.2|4.5e+02 S_Transcript_113108:518-1159(+)
MSELQPYKSSRPPMTTTPIRAPTWVSTRRQLEQKLSELHKCTNLAHIKQVQAQIFKANLHQDPFVAPKLISAFSLCRHMALAINLFKQIEYPNVHLYNTLIRAHTQNSQPSQALITFLDMQKNGVFADNFTYPFLLRACSSGPYAFQMVQMFHTHIEKFGFSADIFVPNSLIDSYSKCGAIGLSSARKLFMYMEDRDIVSWNSMISGLVKGAI*

Click here to download the sequence:
Link to NCBI Protein BLAST