Annotated TAIR ID | AT2G27170.1 |
Annotated Gene Name | Structural maintenance of chromosomes (SMC) family protein |
Annotated Gene Symbol(s) | TTN7, SMC3 |
Annotation Type | Ortholog |
Chromosome Position | chr2:11609319-11617064 | Reverse length=1204 |
E-Value | 0 |
Replicate 1 | 17.491698737148 |
Replicate 2 | 21.000846159726 |
Replicate 3 | 19.758981148488 |
Replicate 1 | 27.501789670394 |
Replicate 2 | 26.549164775775 |
Replicate 3 | 25.101400623625 |
Replicate 1 | 24.600420661192 |
Replicate 2 | 20.576107771389 |
Replicate 3 | 20.261360152823 |
>S_Transcript_11313.p1 GENE.S_Transcript_11313~~S_Transcript_11313.p1 ORF type:complete len:1205 (+),score=313.27,SMC_N|PF02463.15|1.6e-60,SMC_hinge|PF06470.9|6.1e-29,AAA_21|PF13304.2|0.00023,AAA_21|PF13304.2|6.3e+03,AAA_21|PF13304.2|3.5e-08 S_Transcript_11313:206-3820(+)
ATGCATATAAAGCAGGTCATTATCGAAGGGTTTAAGAGCTACAAAGAGCAAGTCGCTACTGAAGATTTCAGTCCCAAAGTCAACTGTGTTGTTGGTGCTAATGGATCGGGGAAGTCAAACTTTTTTCATGCTATTCGTTTTGTGCTCAGCGATCTTTTTCAAAACCTTCGCAGTGAAGACAGACATGCTTTACTTCATGAAGGAACAGGAAATCAAGTTTTGACTGCGTTTGTGGAGATTGTGTTTGACAACTTTGACAATAGAATTCCGGTTGACAAAGAGGAAGTTCGTTTGCGACGAACAATTGGGCTAAAAAAAGATGAATATTTTTTGGATGGGAAGCATATCACGAAAACTGAAGTTATGAATCTTTTGGAAAGTGCTGGTTTCTCTCGATCAAACCCTTACTACGTTGTACAGCAAGGAAAGATAGCATCACTGACACTTATGAAAGACTCTGAACGACTAGATTTGCTGAAAGAAATTGGTGGAACCAGGGTTTATGAGGAGAGGCGGCGTGAGAGTTTGAAAATCATGCAAGAAACAGGAAACAAAAGAAAACAGATAATTGAAGTGGTTAAATACCTGGATGAGCGGTTGAAGGAGCTGGATGAAGAGAAGGAGGATCTCAGAAAATATCAACAGCTTGACAAGCAGAGAAAATCCCTGGAATACACCTTATATGATAAGGAACTTCAGGATGCTCGGCAGAGGTTGGCCAAGGTGGAAGAAGATCGTGACAAGGTTTCTGAGAAATCAACTAAAATGTATCATGCCGTGCTTCAGTCTGAGGAAAAGTGTAAGGAACTGGACGAGGATTTTAAAAGGCTTACCAAAGAGCAGCAAGTGTTAAGCAAAGAGAAAATGGTGATCGAGAAACATCGAGCTGAAGCAATTCAAAGGAAGACAGAACTTGAGCTTGACTGCAGAGACCTAAAAGAGAGGATCTCTAGAAGTTCTAGTGCACAGAATGAGGCAGCCAAACAGCTTGAGCATGTGAAGAAGGATATTTTTGACTCGAAAAATGATCTAGACAATATTCAGCCTTTGTATGACGAGTTAAAGAAGAAGGAGGATGAAATGACAAAAGGAATAATGGAGCGTGAAAAGAAGCTTAGCATTCTTTATCAAAAACAAGGTCGCGCCACTCAGTTTTCGAGTAAAGCAGCTCGTGACAAATGGCTTAAAAATGAGATTGACGAACTTGATCAAGTTCTTCAGACAAATGAGTCGCAGGGAAAAAAACTCCGGGGTGAAATCAAGCACCTTGAGTCCCAGTTGGAGGATCAAGATGATTTTGTTAACAACCGGAAAGCTTATTATGCAGAAGTAGAGAACAGCATTAAACAGGCTGAAAGAGAGACTCTTCCATCCAAGGGACAGAGGGACAGGCTGCAGGATGAGCGGAAGTCTTTATGGGAACAAGAAAATGAACTTTCCTCTGAAATTGAGAAGTTGAAGTCAGAAGTTGTGAAGGCCGAAAAGAACCTTGACCATGCAACTCCTGGTGATATTAGGAGAGGGCTAAATTCTGTTAGGAAAATTATCAGGGAATATGGGATTGGTGGTGTATTCGGGCCAATTATTGAATTATTGAACTGTGATGAGAGGTTTTTCACTGCAGTTGAAGTTACTGCTGGGAACAGCTTGTTCCACGTTGTGGTTGATACAGATGAAACAGCTACTCAGATAATTAGACAACTAAATGCAACTAAGGGAGGGCGTGTGACATTTATACCTCTGAACAAGGTTAAGCCCCCACAAGTTACATGCCCACAGAGCGATGATGTGGTTCCTTTGTTGAAAAAATTGAGGTTTCATCAAGACTACACAAAAGCTTTCTCTCAGGTATTTGGTAGAACTGTAGTATGTCGAAACCTGGATGTAGCTACAAGAGTTGCTCGTACTGATGGTTTAGATTGCATAACTCTGGAAGGTGACCAAGTCAGCAAGAAAGGTGGGATGACTGGAGGATTTTATGATAGTAGGCGGTCGAAACTGAAGTTCATGAACATTATTAAAACGAATACAATTGTTATAGACCGAAAGGAGATTGAGTTGAAAGAAGTGAGGGAAAAACTTCAAGAAATAGATAAAGAAATCACTGAAAAAATCACGGAGCAACAGAAAATTGAAGCTGACTGTGCTCATCAAAGATCAGTACTGGAGCAGCTTAAGCAGGATATTGCTGACGCTAACAAGCAAAAAAAAGCCACGTTGACTGCCCTGGAAAAAAAGAGAAAGTTACTCGACAGTTTGCACGCACAGACTGAACAGCTGAATGCTAATATAGCTCTGAAAAAAGCTGAAATGGGTACAGAACTTGTTGATCATTTGACCCCAGAGGAAAGAGACCTTCTGTCTCGATTGAACCCGGAAATCAAGGGGATGAAAGAGAAACTCATGGAATATCGGACAGAGCTTGTGGAGATCGAGACAAAGAAATTAGAGCTTGAAACCAATCTTTCCACAAATCTGTTGCGGCGTCAGCAGGAGTTGGAGGCCATGTTATCATCTGCAGAATCCGAAAATTTGTTGGCTGAAGTCGAATCCAAAGAGAATGAGCTAAAGGAAGCTAATTCTTTGGTGGCAGATGCAACTGAGAAGCTCAAAAGATTTTCTGGGTCAATGGATCAAATCTCCAAGGAACTGAAGAAGATTAAAATTGAAAATGATAAATTACAGAAATCAAGAGAAGACTATGAGAAGCAACTGCAGAATGAAGCAGAAGAACTGGAGAAACTAATAAGTAATAAGAATATGCTTCTTGCTAGACAGGAGGAATACTCAAAAAAAATCAGAGACTTGGGTCCATTGTCTTCAGAAGCTTTTGATACTTACAGACGGAAAAGTACCAAAGAATTGCATAAAATGCTGCATAAATGTAATGAGCAACTCCAACAGTTTAGTCATGTCAACAAGAAGGCTCTTGATCAATATGTAAATTTCACTGAGCAACGAGAGGAACTCCAGAAAAGACAAGCTGAACTCGACGCGGCTGATGAGAAAATTCGCGAATTAATCTCAGTTCTGGATCAAAGAAAGGATGAGTCTATTGAGCGTACTTTCAAGGGTGTTGCTAGGAATTTCCGCGAGGTATTCTCTGAACTTGTGCAAGGTGGGCATGGATTCTTGGTGATGATGAAGAAAAAGGATGGTGACAATGGCGATGATGACCAGGATGAAGATGGTCCTCGTGAAGCAGACAATGAGGGAAGGATCGAGAAATATATTGGAGTCAAAGTCAAGGTGTCATTTACTGGGCAAGGGGAAACGCAGTCGATGAAGCAGCTATCTGGGGGTCAGAAAACTGTTGTAGCATTGGCATTGATCTTTGCCATACAGCGATGTGATCCAGCTCCATTTTATCTGTTTGATGAGATAGATGCAGCTTTGGATCCTCAATACAGAACTGCTGTCGGAAATATGATTCGTAGGTTGGCTGACCAAGCAAATACCCAATTTATAACCACAACATTTCGACCGGAGCTCGTGAAAATTGCTGACAAGATATACGGGGTGACACATAATAAGCGTGTGAGCCGTGTCAATGTTGTCACTAAAGATGAAGCGCTGCTCTTTATTGAACGAGATCAATCTCACAATGCTGAGTAA
Click here to download the sequence:
Link to NCBI Nucleotide BLAST
>S_Transcript_11313.p1 GENE.S_Transcript_11313~~S_Transcript_11313.p1 ORF type:complete len:1205 (+),score=313.27,SMC_N|PF02463.15|1.6e-60,SMC_hinge|PF06470.9|6.1e-29,AAA_21|PF13304.2|0.00023,AAA_21|PF13304.2|6.3e+03,AAA_21|PF13304.2|3.5e-08 S_Transcript_11313:206-3820(+)
MHIKQVIIEGFKSYKEQVATEDFSPKVNCVVGANGSGKSNFFHAIRFVLSDLFQNLRSEDRHALLHEGTGNQVLTAFVEIVFDNFDNRIPVDKEEVRLRRTIGLKKDEYFLDGKHITKTEVMNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRESLKIMQETGNKRKQIIEVVKYLDERLKELDEEKEDLRKYQQLDKQRKSLEYTLYDKELQDARQRLAKVEEDRDKVSEKSTKMYHAVLQSEEKCKELDEDFKRLTKEQQVLSKEKMVIEKHRAEAIQRKTELELDCRDLKERISRSSSAQNEAAKQLEHVKKDIFDSKNDLDNIQPLYDELKKKEDEMTKGIMEREKKLSILYQKQGRATQFSSKAARDKWLKNEIDELDQVLQTNESQGKKLRGEIKHLESQLEDQDDFVNNRKAYYAEVENSIKQAERETLPSKGQRDRLQDERKSLWEQENELSSEIEKLKSEVVKAEKNLDHATPGDIRRGLNSVRKIIREYGIGGVFGPIIELLNCDERFFTAVEVTAGNSLFHVVVDTDETATQIIRQLNATKGGRVTFIPLNKVKPPQVTCPQSDDVVPLLKKLRFHQDYTKAFSQVFGRTVVCRNLDVATRVARTDGLDCITLEGDQVSKKGGMTGGFYDSRRSKLKFMNIIKTNTIVIDRKEIELKEVREKLQEIDKEITEKITEQQKIEADCAHQRSVLEQLKQDIADANKQKKATLTALEKKRKLLDSLHAQTEQLNANIALKKAEMGTELVDHLTPEERDLLSRLNPEIKGMKEKLMEYRTELVEIETKKLELETNLSTNLLRRQQELEAMLSSAESENLLAEVESKENELKEANSLVADATEKLKRFSGSMDQISKELKKIKIENDKLQKSREDYEKQLQNEAEELEKLISNKNMLLARQEEYSKKIRDLGPLSSEAFDTYRRKSTKELHKMLHKCNEQLQQFSHVNKKALDQYVNFTEQREELQKRQAELDAADEKIRELISVLDQRKDESIERTFKGVARNFREVFSELVQGGHGFLVMMKKKDGDNGDDDQDEDGPREADNEGRIEKYIGVKVKVSFTGQGETQSMKQLSGGQKTVVALALIFAIQRCDPAPFYLFDEIDAALDPQYRTAVGNMIRRLADQANTQFITTTFRPELVKIADKIYGVTHNKRVSRVNVVTKDEALLFIERDQSHNAE*
Click here to download the sequence:
Link to NCBI Protein BLAST