Transcript Information: S_Transcript_11318.p1


Annotated TAIR IDAT5G27290.1
Annotated Gene Nameunknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54680.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:9618590-9620473 | Reverse length=341
E-Value2.5E-167
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 119.318473788188
Replicate 225.385498828225
Replicate 323.053420104501
Condition 2: 8 Hour
Replicate 121.710788937322
Replicate 217.115811911116
Replicate 317.014155467832
Condition 3: 24 Hour
Replicate 125.924349684621
Replicate 232.152576061625
Replicate 326.057714551069


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_11318.p1 GENE.S_Transcript_11318~~S_Transcript_11318.p1 ORF type:complete len:332 (+),score=72.10 S_Transcript_11318:185-1180(+)
ATGGCATTGGGCACCCTGTCTTCACTTGGTACCTTCACATTTACAATATCATGTGGGCCCACCTCCGAAACTAGAGGAGGAGTTGACAGAAGAAAGCTTTTGGAGAAGCTAGACAAGGAGCTGGAGCTCTCCAATGGCGATGAAAGGGCTGCTCTTTCTCTTGTCAAACATTCTCAGGGCCAGCCTGGTGGTCTCCGTTGCTTTGGGACAGCTCGACAGGTGCCTCAAAGGCTATATACTTTGGATGAACTGAAGTTGAATGGAATTGAAGCTGCATCTCTCTTATCGCCTGTTGATACCACTCTTGGTTCGATCGAGAGGAACCTGCAGATTGCTGCTGTGTTAGGTGGCGTTGCTGCTTGGAATGCCCTTGGACTTAGCCCCCAACAAGTCCTTTATTCCTCTTTGGGATTGTTGTTTTTTTGGACATTGGACTTGGTTTCTTTTAATGGGGGAATCGGAAGCTTGGTTCTTGATACAATTGGCCATGCTGTCAGTAAAAAGTATCATAACCGTGTTATTCAACATGAGGCTGGCCACTTCTTGATCGCCTACTTGGTTGGTATCCTCCCAAGGGCATACACACTTTCAAGCTTAGAAGCATTGAGTAAAGAAGGCTCCCTTAATGTTCAAGCCGGGACAACTTTTGTGGACTTCGAATTCCTTGATGAAGTCAACACCGGCAAAGTGTCAGCCACTATGCTGAATAGATTCTCATGTATAGCCTTGGCCGGTGTAGCAACGGAGTACCTGTTATACGGATATGCAGAAGGAGGCTTGGCTGATATCAACAAGCTGGATGTATTGCTCAAGAGCTTAGGCTTCACACAGAAGAAAACAGATTCACAGGTGAGATGGGCAGTTTTAAACACTATTCTTCTCCTACGACGTCATGAAGAAGCTCGAGCAAGACTTGCTGATGCAATGTCTGCGGGCAAATCTGTCGCTTCTTGCATTAATGTGATTGAGGAAGCCATTGTTGATGAAGAGATTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_11318.p1 GENE.S_Transcript_11318~~S_Transcript_11318.p1 ORF type:complete len:332 (+),score=72.10 S_Transcript_11318:185-1180(+)
MALGTLSSLGTFTFTISCGPTSETRGGVDRRKLLEKLDKELELSNGDERAALSLVKHSQGQPGGLRCFGTARQVPQRLYTLDELKLNGIEAASLLSPVDTTLGSIERNLQIAAVLGGVAAWNALGLSPQQVLYSSLGLLFFWTLDLVSFNGGIGSLVLDTIGHAVSKKYHNRVIQHEAGHFLIAYLVGILPRAYTLSSLEALSKEGSLNVQAGTTFVDFEFLDEVNTGKVSATMLNRFSCIALAGVATEYLLYGYAEGGLADINKLDVLLKSLGFTQKKTDSQVRWAVLNTILLLRRHEEARARLADAMSAGKSVASCINVIEEAIVDEEI*

Click here to download the sequence:
Link to NCBI Protein BLAST