Transcript Information: S_Transcript_11319.p1


Annotated TAIR IDAT5G27290.1
Annotated Gene Nameunknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54680.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:9618590-9620473 | Reverse length=341
E-Value1.9E-111
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.8178471896073
Replicate 28.9116365663687
Replicate 38.0280145305085
Condition 2: 8 Hour
Replicate 15.0177388981489
Replicate 28.4223430173088
Replicate 37.6904234496403
Condition 3: 24 Hour
Replicate 18.9092858157717
Replicate 27.1990930889574
Replicate 37.4182483544459


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_11319.p1 GENE.S_Transcript_11319~~S_Transcript_11319.p1 ORF type:complete len:255 (+),score=55.64 S_Transcript_11319:173-937(+)
ATGGCATTGGGCACCCTGTCTTCACTTGGTACCTTCACATTTACAATATCATGTGGGCCCACCTCCGAAACTAGAGGAGGAGTTGACAGAAGAAAGCTTTTGGAGAAGCTAGACAAGGAGCTGGAGCTCTCCAATGGCGATGAAAGGGCTGCTCTTTCTCTTGTCAAAAATTCTCAGGGTCAGCCTGCTGGTCTCCGTTGCTTTGGGGCAGCTCGACAGGTGCCTCAAAGGCTATATACTTTGGATGAACTGAAGTTGAATGGAATTGAAGCTGCATCTCTCTTATCGCCTGTTGATACCACTCTTGGTTCGATCGAGAGGAACCTGCAGATTGCTGCTGTGTTAGGTGGCGTTGCTGCATGGAATGCCCTTGGACTTGGCCCCCAACAAGTCCTTTATACCTCTTTGGGATTGTTGTTTTTGTGGACATTGGACTTGGTTTCTTTTAATGGGGGAATCGGAAGCTTGGTTCTTGATACAATTGGCCATGCTGTCAGTAAAAAGTATCATAACCGTGTTATTCAACATGAGGCTGGCCACTTCTTGATCGCCTACTTGGTTGGTATCCTCCCAAGGGCATACACACTTTCAAGCTTAGAAGCATTGAGTAAAGAAGGCTCCCTTAATGTTCAAGCCGGGACAACTTTTGTGGACTTCGAATTCCTTGATGAAGTCAACACCGGCAAAGTGTCAGCCACTGTATGTTCTCTTGTTCAGAGCAACTTTTCTCTTGCGATATTTAGTGTCAATAATTGGTGTTACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_11319.p1 GENE.S_Transcript_11319~~S_Transcript_11319.p1 ORF type:complete len:255 (+),score=55.64 S_Transcript_11319:173-937(+)
MALGTLSSLGTFTFTISCGPTSETRGGVDRRKLLEKLDKELELSNGDERAALSLVKNSQGQPAGLRCFGAARQVPQRLYTLDELKLNGIEAASLLSPVDTTLGSIERNLQIAAVLGGVAAWNALGLGPQQVLYTSLGLLFLWTLDLVSFNGGIGSLVLDTIGHAVSKKYHNRVIQHEAGHFLIAYLVGILPRAYTLSSLEALSKEGSLNVQAGTTFVDFEFLDEVNTGKVSATVCSLVQSNFSLAIFSVNNWCY*

Click here to download the sequence:
Link to NCBI Protein BLAST