Transcript Information: S_Transcript_11323.p1


Annotated TAIR IDAT5G27290.1
Annotated Gene Nameunknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54680.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:9618590-9620473 | Reverse length=341
E-Value1.8E-105
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.1706942234238
Replicate 21.9757721991804
Replicate 33.7160736884867
Condition 2: 8 Hour
Replicate 11.591447038592
Replicate 21.9199720847527
Replicate 30.95444093753648
Condition 3: 24 Hour
Replicate 13.6679841681968
Replicate 25.3276870496637
Replicate 35.0820537234189


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_11323.p1 GENE.S_Transcript_11323~~S_Transcript_11323.p1 ORF type:complete len:268 (+),score=57.12 S_Transcript_11323:173-976(+)
ATGGCATTGGGCACCCTGTCTTCACTTGGTACCTTCACATTTACAATATCATGTGGGCCCACCTCCGAAACTAGAGGAGGAGTTGACAGAAGAAAGCTTTTGGAGAAGCTAGACAAGGAGCTGGAGCTCTCCAATGGCGATGAAAGGGCTGCTCTTTCTCTTGTCAAAAATTCTCAGGGTCAGCCTGCTGGTCTCCGTTGCTTTGGGGCAGCTCGACAGGTGCCTCAAAGGCTATATACTTTGGATGAACTGAAGTTGAATGGAATTGAAGCTGCATCTCTCTTATCGCCTGTTGATACCACTCTTGGTTCGATCGAGAGGAACCTGCAGATTGCTGCTGTGTTAGGTGGCGTTGCTGCATGGAATGCCCTTGGACTTGGCCCCCAACAAGTCCTTTATACCTCTTTGGGATTGTTGTTTTTGTGGACATTGGACTTGGTTTCTTTTAATGGGGGAATCGGAAGCTTGGTTCTTGATACAATTGGCCATGCTGTCAGTAAAAAGTATCATAACCGTGTTATTCAACATGAGGCTGGCCACTTCTTGATCGCCTACTTGGTTGGTATCCTCCCAAGGGCATACACACTTTCAAGCTTAGAAGCATTGAGTAAAGAAGGCTCCCTTAATGTTCAAGCCGGGACAACTTTTGTGGACTTCGAATTCCTTGATGAAGTAGGCTTGTTTATGCTCTGCTCTGCTGATTTTTTTTTTGTTCGTCTCTCCTTTGCATTCTTTGTATTTGTGCAAGTCCTACTTGCACATTTATTGCCCTGGCCTACATTATTCCTTGGACATATGGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_11323.p1 GENE.S_Transcript_11323~~S_Transcript_11323.p1 ORF type:complete len:268 (+),score=57.12 S_Transcript_11323:173-976(+)
MALGTLSSLGTFTFTISCGPTSETRGGVDRRKLLEKLDKELELSNGDERAALSLVKNSQGQPAGLRCFGAARQVPQRLYTLDELKLNGIEAASLLSPVDTTLGSIERNLQIAAVLGGVAAWNALGLGPQQVLYTSLGLLFLWTLDLVSFNGGIGSLVLDTIGHAVSKKYHNRVIQHEAGHFLIAYLVGILPRAYTLSSLEALSKEGSLNVQAGTTFVDFEFLDEVGLFMLCSADFFFVRLSFAFFVFVQVLLAHLLPWPTLFLGHME*

Click here to download the sequence:
Link to NCBI Protein BLAST