Transcript Information: S_Transcript_11324.p1


Annotated TAIR IDAT5G27290.1
Annotated Gene Nameunknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54680.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:9618590-9620473 | Reverse length=341
E-Value1.2E-55
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.5161456641518
Replicate 25.348555044246
Replicate 34.2474180071323
Condition 2: 8 Hour
Replicate 10
Replicate 23.1185001134164
Replicate 32.196178238089
Condition 3: 24 Hour
Replicate 14.5013699313952
Replicate 28.9281681967429
Replicate 33.821521879563


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_11324.p1 GENE.S_Transcript_11324~~S_Transcript_11324.p1 ORF type:complete len:165 (+),score=38.89 S_Transcript_11324:185-679(+)
ATGGCATTGGGCACCCTGTCTTCACTTGGTACCTTCACATTTACAATATCATGTGGGCCCACCTCCGAAACTAGAGGAGGAGTTGACAGAAGAAAGCTTTTGGAGAAGCTAGACAAGGAGCTGGAGCTCTCCAATGGCGATGAAAGGGCTGCTCTTTCTCTTGTCAAACATTCTCAGGGCCAGCCTGGTGGTCTCCGTTGCTTTGGGACAGCTCGACAGGTGCCTCAAAGGCTATATACTTTGGATGAACTGAAGTTGAATGGAATTGAAGCTGCATCTCTCTTATCGCCTGTTGATACCACTCTTGGTTCGATCGAGAGGAACCTGCAGATTGCTGCTGTGTTAGGTGGCGTTGCTGCTTGGAATGCCCTTGGACTTAGCCCCCAACAAGTCCTTTATTCCTCTTTGGGATTGTTGTTTTTTTGGACATTGGACTTGGTAACTTTTGCTTTTTTGTCGAACTTGAGATACTATGTTCAGCATCTAAACCTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_11324.p1 GENE.S_Transcript_11324~~S_Transcript_11324.p1 ORF type:complete len:165 (+),score=38.89 S_Transcript_11324:185-679(+)
MALGTLSSLGTFTFTISCGPTSETRGGVDRRKLLEKLDKELELSNGDERAALSLVKHSQGQPGGLRCFGTARQVPQRLYTLDELKLNGIEAASLLSPVDTTLGSIERNLQIAAVLGGVAAWNALGLSPQQVLYSSLGLLFFWTLDLVTFAFLSNLRYYVQHLNL*

Click here to download the sequence:
Link to NCBI Protein BLAST