Transcript Information: S_Transcript_113278.p1


Annotated TAIR IDAT4G21210.1
Annotated Gene NamePPDK regulatory protein
Annotated Gene Symbol(s)ATRP1, RP1
Annotation TypeOrtholog
Chromosome Positionchr4:11307002-11308587 | Forward length=403
E-Value9.7E-161
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.82953297016
Replicate 27.9273226548646
Replicate 38.0237877766314
Condition 2: 8 Hour
Replicate 113.247590954583
Replicate 215.350380993059
Replicate 314.948776242454
Condition 3: 24 Hour
Replicate 112.24637407806
Replicate 210.645123619193
Replicate 313.484512917887


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_113278.p1 GENE.S_Transcript_113278~~S_Transcript_113278.p1 ORF type:5prime_partial len:462 (+),score=71.76,Kinase-PPPase|PF03618.10|9.7e-90 S_Transcript_113278:3-1388(+)
CAGTCCTTGTTTTATTGCACCAAAAAAAAAGTTCTTGTTTTAAGAATATCTTTTTTTGTTACAAATTTTAAGAAAAATATTTTAAAACTTTGGAAAACAGAAGAGGGGAAGGAGGCGGAAGAATTAAAAAAGCAGAAAGAAATCGCTCCAAAAAAACAAGGAGAGAAAGAAATGTTAGCTTGGGCAAGGCACGGCCTGCCGAAAACCCAACCAACACCGGTATCAATTTCACCTCCACCCGAACACACCCAATCCCAGCCCAATTCCCTTTCTCTCTCCTCCACGTCAGCAAACCTCCAAACCCAACCCCAGCCCCGTAAGCTGAAGGGCAGCTCGAGGCTAAACCAATGGTCGAGAGCACGCACTCTCAGGTCGGGCCGGAAACTGGACCGCCCGTCGAACAAGACCGCCACTGAGACCACATCGTACCGGCAATTGACAAGTCGGACCGAAAACGGCGGCGTTTCGGATTCGGAAGGGAGTGACGGAGAAGAGGAGAAGGAAAGGGGGAAGGAAGAGAAGGCGATATATATAGTGTCAGATGGGACTGGGTGGACCGCTGAACATGCTGTTAATGCTGCTTTAGGCCAGTTTGATTATTGCCTTGTTGATGGCGGCTGCCCTGTTGATACTCATTTGTTCTCTGGGATTGATGATGTAGAGCGTTTGATGGAAGTTGTGAAACAAGCTGCAAAAGAAGGTGCTTTACTTGTGTATACCCTTGCTGATCCATCAATGGCTGACTCTGCAAAGAAAGCCTGCAAACTGTGGGGCGTACCATCAACTGATGTCCTGGGCCCAGTTACAGAGACAATTGCTTCTCATCTTGGTGTCTCACCTTCAGGCATCCCTCGTAGTGCTGCAGGTGTGCCCCTAGGTGAAGACTACTTCCGAAGAATTGAAGCGATTGAGTTTACCATCAAGCAAGATGATGGAGCTCTTCCCCAGAACTTGCACAAGGCTGATATTGTACTTACTGGTGTCTCTCGAACTGGGAAGACTCCTCTATCAATATACCTGGCACAAAAAGGTTACAAAGTAGCAAATATTCCAATCGTGATCGGTTTGGCATTACCAAAAACTCTGTTTGAGATTGATCCGGATAAGGTTTTTGGTTTAACTATAAACCCAGTGGTCTTGCAAACAATCAGAAAGTCACGAGCCAAAAGCCTGGGCTTAGCTGAAGATGACAGGGGTAACTACTCGGACATGGACTATGTGAGAAAAGAGTTAGAAAACGCAATGAAAATTTACTCTCAGAATCCCAGATGGCGTGTCATTGAGGTGACTGGCAAAGCTGTTGAAGAAAGTGCAGCTGTTATCTTGAGGCTGTACCATGACCGAAAGCAGAAGTGTTCGATGCCCAGAATATCTAAACGCTACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_113278.p1 GENE.S_Transcript_113278~~S_Transcript_113278.p1 ORF type:5prime_partial len:462 (+),score=71.76,Kinase-PPPase|PF03618.10|9.7e-90 S_Transcript_113278:3-1388(+)
QSLFYCTKKKVLVLRISFFVTNFKKNILKLWKTEEGKEAEELKKQKEIAPKKQGEKEMLAWARHGLPKTQPTPVSISPPPEHTQSQPNSLSLSSTSANLQTQPQPRKLKGSSRLNQWSRARTLRSGRKLDRPSNKTATETTSYRQLTSRTENGGVSDSEGSDGEEEKERGKEEKAIYIVSDGTGWTAEHAVNAALGQFDYCLVDGGCPVDTHLFSGIDDVERLMEVVKQAAKEGALLVYTLADPSMADSAKKACKLWGVPSTDVLGPVTETIASHLGVSPSGIPRSAAGVPLGEDYFRRIEAIEFTIKQDDGALPQNLHKADIVLTGVSRTGKTPLSIYLAQKGYKVANIPIVIGLALPKTLFEIDPDKVFGLTINPVVLQTIRKSRAKSLGLAEDDRGNYSDMDYVRKELENAMKIYSQNPRWRVIEVTGKAVEESAAVILRLYHDRKQKCSMPRISKRY*

Click here to download the sequence:
Link to NCBI Protein BLAST