Transcript Information: S_Transcript_113300.p1


Annotated TAIR IDAT4G22745.1
Annotated Gene Namemethyl-CPG-binding domain 1
Annotated Gene Symbol(s)MBD1
Annotation TypeOrtholog
Chromosome Positionchr4:11947421-11948514 | Reverse length=204
E-Value8.3E-59
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.6926205850653
Replicate 26.0171244247768
Replicate 36.1147039421563
Condition 2: 8 Hour
Replicate 112.43030772496
Replicate 213.040275410322
Replicate 312.082779925818
Condition 3: 24 Hour
Replicate 16.1913306149812
Replicate 27.1506143476176
Replicate 34.9904579839


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_113300.p1 GENE.S_Transcript_113300~~S_Transcript_113300.p1 ORF type:complete len:187 (+),score=40.45,zf-CW|PF07496.11|1.1e-11,MBD|PF01429.15|1.7e-09 S_Transcript_113300:688-1248(+)
ATGGAGGTTCACAAGAAACAGAAAACTGAAGATGTTTACAAGCCCAGACGTATCGACTTGTATGCGATACAGTGCAGCAAATGCCTGAAATGGAGGAGCATCTCTACAAAGGAAGAGTACGAGGAACTGAGGAGCAAATTCCTAGAAGATCCATTCTACTGCAACAAGAAACCGGAAGCATCATGTGATGATCCAGCAGAACTTGAATGTGATGCAACCCGAACTTGGGTAATCGACAAACCTAACCTTCCGCTGAGCCCAGAAGGATTCACAAGGGAGCTCATCTTGCGATCGGATTTCTCCAAGTTGGATGCTCATTATGTTACTCCAACTGTAAAGAAAGTGAGATGTCGGACAGAAGTAATAGAATTCTTGGAGAAACATCCCGAGTACAAACATATAAATGTTGATGACTTCAACTTTACTGTTCCAAAGATTATGGAAGATACTATCCCTGAGAGTGCTCGAAAGAAGCTCCTTGAGAAATCAAGGAGCAAGAAGGAAGACGGCACCAGTCCTAATGTCAAGAAGAAAATTTCCAAGATAAAGAACTTAACATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_113300.p1 GENE.S_Transcript_113300~~S_Transcript_113300.p1 ORF type:complete len:187 (+),score=40.45,zf-CW|PF07496.11|1.1e-11,MBD|PF01429.15|1.7e-09 S_Transcript_113300:688-1248(+)
MEVHKKQKTEDVYKPRRIDLYAIQCSKCLKWRSISTKEEYEELRSKFLEDPFYCNKKPEASCDDPAELECDATRTWVIDKPNLPLSPEGFTRELILRSDFSKLDAHYVTPTVKKVRCRTEVIEFLEKHPEYKHINVDDFNFTVPKIMEDTIPESARKKLLEKSRSKKEDGTSPNVKKKISKIKNLT*

Click here to download the sequence:
Link to NCBI Protein BLAST