Transcript Information: S_Transcript_113430.p1


Annotated TAIR IDAT1G56090.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:20977989-20979185 | Reverse length=272
E-Value3.4E-104
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.7592593449775
Replicate 25.3143945649488
Replicate 33.5000813005373
Condition 2: 8 Hour
Replicate 15.6815820917909
Replicate 28.3282064279274
Replicate 35.9902199473853
Condition 3: 24 Hour
Replicate 12.7904048254409
Replicate 24.4665906026378
Replicate 33.1297427364013


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_113430.p1 GENE.S_Transcript_113430~~S_Transcript_113430.p1 ORF type:complete len:274 (+),score=70.55,TPR_11|PF13414.2|1.6e-10,TPR_11|PF13414.2|0.016,TPR_2|PF07719.13|0.14,TPR_2|PF07719.13|0.031,TPR_2|PF07719.13|0.022,TPR_1|PF00515.24|13,TPR_1|PF00515.24|0.00054,TPR_1|PF00515.24|0.13,TPR_19|PF14559.2|0.00097,TPR_19|PF14559.2|0.00015,TPR_12|PF13424.2|0.00032,TPR_12|PF13424.2|0.013,ANAPC3|PF12895.3|1.2e-05 S_Transcript_113430:308-1129(+)
ATGGCGACTATGGCGTTGTGTAAAGTAGAGAGAGCTCACCAGATGTACCGTGATGGTCGATATAATGAAGCCCTAGGGTTTTACACTGATGCTCTTTCTATGGCCAAGACTAAAGCTCAGAGGATCGCTCTTCATAGCAATCGTGCTGCTTGTTTTCTCAAATTGCATGATTTCAAAAAGGCAGCTGATGAATGTACATCTGTTCTTGAGCTTGATCATAAGCACACTGGAGCACTAATGTTGCGTGCTCAAACTCTGGTCACACTAAAGGAGTATCAATCAGCGCTCTTTGATGTCAATCGGCTCCTGGAGTTGAATCCATCATCAGAAGTATACCTAAACCTTCAAGCACGTTTAAAAACACAATTGTCACTTCCTCCAATACCCGAGGCAGAGACTGAGCTTGAAGAAACAGATGATGACACAAGTGAAAGGGGTGAAGACACAAGTGAAAGGGGTGAGGAATTGGAGAACTATAGAGGAGGGGGAGAAGAAGAAAACAATAGTGTGGCAGGTTTGGTTGCGGAAGAAAATAGCACCGTGGTAGGTTCTGTTGAAAGATCCGAACCTAAAATTCCTACTTCTAGTGGATTCCTTCCTCCTCAATCCATTGGAACCCAACAGTTTTCTGATTCTCATTCGAATGGATGGCTAGCAATCCCAAAACCAAAGGGACACTCTAGTCTTGACTACTCACGCTGGGATGCAGTTGCAGATGGCTCTAGTGAAGATGATGATGATGAAGAAGACGACGATGATGAAGAAACCCGGCCTCAATACAAGTTTCGCGTGAAAACTGTTGACCTCAGACCCGTCAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_113430.p1 GENE.S_Transcript_113430~~S_Transcript_113430.p1 ORF type:complete len:274 (+),score=70.55,TPR_11|PF13414.2|1.6e-10,TPR_11|PF13414.2|0.016,TPR_2|PF07719.13|0.14,TPR_2|PF07719.13|0.031,TPR_2|PF07719.13|0.022,TPR_1|PF00515.24|13,TPR_1|PF00515.24|0.00054,TPR_1|PF00515.24|0.13,TPR_19|PF14559.2|0.00097,TPR_19|PF14559.2|0.00015,TPR_12|PF13424.2|0.00032,TPR_12|PF13424.2|0.013,ANAPC3|PF12895.3|1.2e-05 S_Transcript_113430:308-1129(+)
MATMALCKVERAHQMYRDGRYNEALGFYTDALSMAKTKAQRIALHSNRAACFLKLHDFKKAADECTSVLELDHKHTGALMLRAQTLVTLKEYQSALFDVNRLLELNPSSEVYLNLQARLKTQLSLPPIPEAETELEETDDDTSERGEDTSERGEELENYRGGGEEENNSVAGLVAEENSTVVGSVERSEPKIPTSSGFLPPQSIGTQQFSDSHSNGWLAIPKPKGHSSLDYSRWDAVADGSSEDDDDEEDDDDEETRPQYKFRVKTVDLRPVK*

Click here to download the sequence:
Link to NCBI Protein BLAST