Transcript Information: S_Transcript_113438.p1


Annotated TAIR IDAT3G18990.1
Annotated Gene NameAP2/B3-like transcriptional factor family protein
Annotated Gene Symbol(s)VRN1, REM39
Annotation TypeHomolog
Chromosome Positionchr3:6549077-6551568 | Reverse length=341
E-Value3E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.17981757591338
Replicate 20.59629160966256
Replicate 30.7476784898757
Condition 2: 8 Hour
Replicate 10.72045237557882
Replicate 21.0581279762033
Replicate 30.72012998665478
Condition 3: 24 Hour
Replicate 10.44280169237691
Replicate 20.76566931001174
Replicate 31.3633537516279


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_113438.p1 GENE.S_Transcript_113438~~S_Transcript_113438.p1 ORF type:internal len:148 (+),score=21.76,B3|PF02362.17|1.1e-10 S_Transcript_113438:2-442(+)
GAAGACAAATTCTTCTATCACCACCCAAAAAGCCAAAAAGCCCTACTTGTTGACAGGGGGAATATGAAACGAACGGGGAAGAGAGAGAGAGAAAGAGAAAGCACAAGTCTTGACAATAATGAAGAGAATTTGCCCTGGAGCTTCTACAAGATCATCTTGTCTCCAACTACCCAGTTCACTAAACTGAGGATCCCTAAGAAGTTTGCAGCAACATTCGGTGATGAACTATCAACTACTGCAACCCTCACAGTTCCTATAGGTGTTTCGCGAAAAGTGGCATTAGTGAAAGATCAGGATGATAAATTGTGGTTTCATGATGGTTGGAAAGAATTTGTGGACTATTTTTCCATAGGTTGTGCATACTTTCTGATGTTCACATATGTAGGCAATTCTAATTTCACAGTTCACATATTTGATCCTACTACCTGTGAGATATCGTAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_113438.p1 GENE.S_Transcript_113438~~S_Transcript_113438.p1 ORF type:internal len:148 (+),score=21.76,B3|PF02362.17|1.1e-10 S_Transcript_113438:2-442(+)
EDKFFYHHPKSQKALLVDRGNMKRTGKRERERESTSLDNNEENLPWSFYKIILSPTTQFTKLRIPKKFAATFGDELSTTATLTVPIGVSRKVALVKDQDDKLWFHDGWKEFVDYFSIGCAYFLMFTYVGNSNFTVHIFDPTTCEISY

Click here to download the sequence:
Link to NCBI Protein BLAST